Gm41708 Gene Detail

Summary

• Symbol
  Gm41708
• Name
  predicted gene, 41708

• Feature Type
  lncRNA gene
• IDs
  MGI:5624593
  NCBI Gene: 105246418
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:40038916-40062503 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  627 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624593	lncRNA gene	Chr18:40038682-40062563 (-)
129S1/SvImJ	ENSMUSG00200045082	lncRNA gene	Chr18:37044159-37067354 (-)
A/J	ENSMUSG00195038714	lncRNA gene	Chr18:37196687-37219881 (-)
AKR/J	ENSMUSG00220017361	lncRNA gene	Chr18:37164710-37187906 (-)
BALB/cJ	ENSMUSG00180022635	lncRNA gene	Chr18:37646301-37669498 (-)
C3H/HeJ	ENSMUSG00175039501	lncRNA gene	Chr18:37163619-37186810 (-)
C57BL/6NJ	ENSMUSG00215031090	lncRNA gene	Chr18:36910605-36933799 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025148	lncRNA gene	Chr18:36790316-36813513 (-)
CBA/J	ENSMUSG00210021598	lncRNA gene	Chr18:37188189-37211380 (-)
DBA/2J	ENSMUSG00185021113	lncRNA gene	Chr18:37122755-37145946 (-)
FVB/NJ	ENSMUSG00205039482	lncRNA gene	Chr18:36821809-36845021 (-)
JF1/MsJ	ENSUMUG00000046691	lncRNA gene	Chr18:37254928-37278314 (-)
LP/J	ENSMUSG00230049211	lncRNA gene	Chr18:39239023-39262214 (-)
NOD/ShiLtJ	ENSMUSG00190021851	lncRNA gene	Chr18:36912193-36935380 (-)
NZO/HlLtJ	ENSMUSG00225047236	lncRNA gene	Chr18:39141773-39164972 (-)
PWK/PhJ	ENSLUMG00010013345	lncRNA gene	Chr18:37415175-37438599 (-)
SPRET/EiJ	ENSMSPG00010024508	lncRNA gene	Chr18:37461149-37487287 (-)
WSB/EiJ	ENSIUOG00005008030	lncRNA gene	Chr18:36906590-36929833 (-)

Homology

• Gene Tree
  Gm41708
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000118015 (Evidence)
• NCBI Gene
  105246418

Representative Sequences			Length	Strain/Species
genomic	105246418	NCBI Gene Model | MGI Sequence Detail	23588	C57BL/6J
transcript	XR_877347	RefSeq | MGI Sequence Detail	1858	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;