Gm41669 Gene Detail

Summary

• Symbol
  Gm41669
• Name
  predicted gene, 41669

• Feature Type
  lncRNA gene
• IDs
  MGI:5624554
  NCBI Gene: 105246373
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:13419104-13439395 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  577 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624554	lncRNA gene	Chr18:13419104-13439395 (-)
129S1/SvImJ	ENSMUSG00200020098	lncRNA gene	Chr18:10364795-10389821 (-)
A/J	ENSMUSG00195002360	lncRNA gene	Chr18:10539397-10564427 (-)
AKR/J	ENSMUSG00220012196	lncRNA gene	Chr18:10533949-10558968 (-)
BALB/cJ	ENSMUSG00180004213	lncRNA gene	Chr18:10988464-11013494 (-)
C3H/HeJ	ENSMUSG00175004505	lncRNA gene	Chr18:10527721-10552755 (-)
C57BL/6NJ	ENSMUSG00215003707	lncRNA gene	Chr18:10258364-10278960 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015009	lncRNA gene	Chr18:10351573-10370581 (-)
CBA/J	ENSMUSG00210020405	lncRNA gene	Chr18:10536563-10561595 (-)
DBA/2J	ENSMUSG00185008256	lncRNA gene	Chr18:10558330-10578928 (-)
FVB/NJ	ENSMUSG00205017080	lncRNA gene	Chr18:10309119-10334150 (-)
JF1/MsJ	ENSUMUG00000027275	lncRNA gene	Chr18:10619417-10638378 (-)
LP/J	ENSMUSG00230012117	lncRNA gene	Chr18:12609016-12634042 (-)
NOD/ShiLtJ	ENSMUSG00190017405	lncRNA gene	Chr18:10317718-10338312 (-)
NZO/HlLtJ	ENSMUSG00225028125	lncRNA gene	Chr18:12540102-12560698 (-)
PWK/PhJ	ENSLUMG00010016066	lncRNA gene	Chr18:10849992-10869776 (-)
SPRET/EiJ	ENSMSPG00010004844	lncRNA gene	Chr18:10511382-10527578 (-)
WSB/EiJ	ENSIUOG00005019973	lncRNA gene	Chr18:10434087-10459183 (-)

Homology

• Gene Tree
  Gm41669
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000117536 (Evidence)
• NCBI Gene
  105246373

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117536	Ensembl Gene Model | MGI Sequence Detail	20292	C57BL/6J
transcript	ENSMUST00000234045	Ensembl | MGI Sequence Detail	1226	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;