Gm41496 Gene Detail

Summary

• Symbol
  Gm41496
• Name
  predicted gene, 41496

• Feature Type
  lncRNA gene
• IDs
  MGI:5624381
  NCBI Gene: 105246162
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:91923176-91983416 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2250 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624381	lncRNA gene	Chr16:91913018-91984385 (+)
129S1/SvImJ	ENSMUSG00200037987	lncRNA gene	Chr16:88852172-88912417 (+)
A/J	ENSMUSG00195028885	lncRNA gene	Chr16:88609306-88669840 (+)
AKR/J	ENSMUSG00220016062	lncRNA gene	Chr16:88815490-88882082 (+)
BALB/cJ	ENSMUSG00180015062	lncRNA gene	Chr16:88683380-88743914 (+)
C3H/HeJ	ENSMUSG00175016618	lncRNA gene	Chr16:89020691-89081217 (+)
C57BL/6NJ	ENSMUSG00215036876	lncRNA gene	Chr16:88811831-88872078 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020655	lncRNA gene	Chr16:88362173-88422207 (+)
CBA/J	ENSMUSG00210041152	lncRNA gene	Chr16:88923375-88982677 (+)
DBA/2J	ENSMUSG00185035826	lncRNA gene	Chr16:88871331-88931859 (+)
FVB/NJ	ENSMUSG00205028614	lncRNA gene	Chr16:88646174-88706893 (+)
JF1/MsJ	ENSUMUG00000045197	lncRNA gene	Chr16:89013802-89073113 (+)
LP/J	ENSMUSG00230034860	lncRNA gene	Chr16:91398928-91459163 (+)
NOD/ShiLtJ	ENSMUSG00190026556	lncRNA gene	Chr16:88836656-88896896 (+)
NZO/HlLtJ	ENSMUSG00225031071	lncRNA gene	Chr16:94521131-94581843 (+)
PWK/PhJ	ENSLUMG00010014537	lncRNA gene	Chr16:88640842-88700151 (+)
SPRET/EiJ	ENSMSPG00010030200	lncRNA gene	Chr16:89779652-89843771 (+)
WSB/EiJ	ENSIUOG00005020867	lncRNA gene	Chr16:88744178-88804772 (+)

Homology

• Gene Tree
  Gm41496
  

Human Diseases

• References
  4 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  67 phenotype references
  

• All Mutations and Alleles
  3
• Spontaneous
  1
• Targeted
  1
• Genomic Mutations
  3 involving Gm41496
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000116747 (Evidence)
• NCBI Gene
  105246162

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116747	Ensembl Gene Model | MGI Sequence Detail	60241	C57BL/6J
transcript	ENSMUST00000231220	Ensembl | MGI Sequence Detail	624	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 71

  Diseases 4

  Phenotypes 67
• Earliest
  J:42265 Huang TT, et al., Superoxide-mediated cytotoxicity in superoxide dismutase-deficient fetal fibroblasts. Arch Biochem Biophys. 1997 Aug 15;344(2):424-32
• Latest
  J:385727 Harada K, et al., Preventing Differentiation Towards Primitive Macrophages in Stem Cells With Down Syndrome. Immunology. 2026 Mar;177(3):596-612