Gm41469 Gene Detail

Summary

• Symbol
  Gm41469
• Name
  predicted gene, 41469

• Feature Type
  lncRNA gene
• IDs
  MGI:5624354
  NCBI Gene: 105246130
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:65520628-65532232 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  469 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624354	lncRNA gene	Chr16:65461943-65551514 (+)
129S1/SvImJ	ENSMUSG00200008514	lncRNA gene	Chr16:62374133-62459208 (+)
A/J	ENSMUSG00195001606	lncRNA gene	Chr16:62086402-62171494 (+)
AKR/J	ENSMUSG00220005648	lncRNA gene	Chr16:62357265-62446837 (+)
BALB/cJ	ENSMUSG00180001739	lncRNA gene	Chr16:62215639-62300732 (+)
C3H/HeJ	ENSMUSG00175004557	lncRNA gene	Chr16:62498109-62583202 (+)
C57BL/6NJ	ENSMUSG00215014217	lncRNA gene	Chr16:62301114-62390677 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012658	lncRNA gene	Chr16:62350148-62444641 (+)
CBA/J	ENSMUSG00210015164	lncRNA gene	Chr16:62438369-62527963 (+)
DBA/2J	ENSMUSG00185004683	lncRNA gene	Chr16:62393146-62478236 (+)
FVB/NJ	ENSMUSG00205012201	lncRNA gene	Chr16:62180106-62268665 (+)
JF1/MsJ	ENSUMUG00000015309	lncRNA gene	Chr16:62557409-62639567 (+)
LP/J	ENSMUSG00230007456	lncRNA gene	Chr16:64940777-65030340 (+)
NOD/ShiLtJ	ENSMUSG00190016505	lncRNA gene	Chr16:62435189-62524763 (+)
NZO/HlLtJ	ENSMUSG00225036223	lncRNA gene	Chr16:68185282-68270370 (+)
PWK/PhJ	ENSLUMG00010011869	lncRNA gene	Chr16:62205700-62288678 (+)
SPRET/EiJ	ENSMSPG00010002090	lncRNA gene	Chr16:62941356-63029488 (+)
WSB/EiJ	ENSIUOG00005002369	lncRNA gene	Chr16:62477731-62562811 (+)

Homology

• Gene Tree
  Gm41469
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm41469
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000120212 (Evidence)
• NCBI Gene
  105246130

Representative Sequences			Length	Strain/Species
genomic	105246130	NCBI Gene Model | MGI Sequence Detail	11605	C57BL/6J
transcript	XR_876146	RefSeq | MGI Sequence Detail	712	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76