Gm41392 Gene Detail

Summary

• Symbol
  Gm41392
• Name
  predicted gene, 41392

• Feature Type
  lncRNA gene
• IDs
  MGI:5624277
  NCBI Gene: 105246030
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:96392353-96396645 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  307 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624277	lncRNA gene	Chr15:96382954-96396769 (+)
129S1/SvImJ	ENSMUSG00200052925	lncRNA gene	Chr15:93592709-93593075 (+)
A/J	ENSMUSG00195047720	lncRNA gene	Chr15:93446639-93447005 (+)
AKR/J	ENSMUSG00220049707	lncRNA gene	Chr15:93446675-93447037 (+)
BALB/cJ	ENSMUSG00180046999	lncRNA gene	Chr15:93364386-93364752 (+)
C3H/HeJ	ENSMUSG00175049464	lncRNA gene	Chr15:93626945-93627311 (+)
C57BL/6NJ	ENSMUSG00215052129	lncRNA gene	Chr15:93427293-93427659 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005047296	lncRNA gene	Chr15:92911898-92912264 (+)
CBA/J	ENSMUSG00210032159	lncRNA gene	Chr15:93406627-93406989 (+)
DBA/2J	ENSMUSG00185044444	lncRNA gene	Chr15:93456853-93457215 (+)
FVB/NJ	ENSMUSG00205047492	lncRNA gene	Chr15:93167563-93167929 (+)
JF1/MsJ	ENSUMUG00000057443	lncRNA gene	Chr15:92953058-92953424 (+)
LP/J	ENSMUSG00230041652	lncRNA gene	Chr15:96772386-96772752 (+)
NOD/ShiLtJ	ENSMUSG00190051281	lncRNA gene	Chr15:93464526-93464892 (+)
NZO/HlLtJ	ENSMUSG00225044141	lncRNA gene	Chr15:97072698-97073064 (+)
PWK/PhJ	ENSLUMG00010050084	lncRNA gene	Chr15:93110077-93110443 (+)
SPRET/EiJ	ENSMSPG00010050083	lncRNA gene	Chr15:94937607-94937973 (+)
WSB/EiJ	ENSIUOG00005038457	lncRNA gene	Chr15:93521451-93521817 (+)

Homology

• Gene Tree
  Gm41392
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Gene trapped
  3
• Genomic Mutations
  1 involving Gm41392
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  2

• Ensembl
  ENSMUSG00000116253 (Evidence)
• NCBI Gene
  105246030

Representative Sequences			Length	Strain/Species
genomic	105246030	NCBI Gene Model | MGI Sequence Detail	4293	C57BL/6J
transcript	XR_875620	RefSeq | MGI Sequence Detail	748	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14