Gm41349 Gene Detail

Summary

• Symbol
  Gm41349
• Name
  predicted gene, 41349

• Feature Type
  lncRNA gene
• IDs
  MGI:5624234
  NCBI Gene: 105245981
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:75962554-75969519 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  180 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624234	lncRNA gene	Chr15:75962554-75973131 (+)
129S1/SvImJ	ENSMUSG00200053760	lncRNA gene	Chr15:73084685-73086778 (+)
A/J	ENSMUSG00195052239	lncRNA gene	Chr15:73059110-73061203 (+)
AKR/J	ENSMUSG00220053411	lncRNA gene	Chr15:73070166-73072259 (+)
BALB/cJ	ENSMUSG00180053469	lncRNA gene	Chr15:72885831-72887924 (+)
C3H/HeJ	ENSMUSG00175053399	lncRNA gene	Chr15:73247708-73249801 (+)
C57BL/6NJ	ENSMUSG00215053043	lncRNA gene	Chr15:72976508-72978601 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048426	lncRNA gene	Chr15:72594799-72596892 (+)
CBA/J	ENSMUSG00210049469	lncRNA gene	Chr15:73022948-73025041 (+)
DBA/2J	ENSMUSG00185052060	lncRNA gene	Chr15:73001668-73003761 (+)
FVB/NJ	ENSMUSG00205050764	lncRNA gene	Chr15:72752382-72754475 (+)
JF1/MsJ	ENSUMUG00000056440	lncRNA gene	Chr15:72660639-72662733 (+)
LP/J	ENSMUSG00230052947	lncRNA gene	Chr15:76365634-76367727 (+)
NOD/ShiLtJ	ENSMUSG00190053618	lncRNA gene	Chr15:73005366-73007459 (+)
NZO/HlLtJ	ENSMUSG00225054040	lncRNA gene	Chr15:76670155-76672248 (+)
PWK/PhJ	ENSLUMG00010053208	lncRNA gene	Chr15:72941750-72943844 (+)
SPRET/EiJ	ENSMSPG00010051572	lncRNA gene	Chr15:74553880-74555792 (+)
WSB/EiJ	ENSIUOG00005050820	lncRNA gene	Chr15:73062440-73064533 (+)

Homology

• Gene Tree
  Gm41349
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  3
• Genomic Mutations
  3 involving Gm41349
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  3

• Ensembl
  ENSMUSG00000116288 (Evidence)
• NCBI Gene
  105245981

Representative Sequences			Length	Strain/Species
genomic	105245981	NCBI Gene Model | MGI Sequence Detail	6966	C57BL/6J
transcript	XR_003951569	RefSeq | MGI Sequence Detail	5501	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6