Gm41322 Gene Detail

Summary

• Symbol
  Gm41322
• Name
  predicted gene, 41322

• Feature Type
  lncRNA gene
• IDs
  MGI:5624207
  NCBI Gene: 105245950
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:52308492-52313139 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  276 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624207	lncRNA gene	Chr15:52308490-52313157 (+)
129S1/SvImJ	ENSMUSG00200019618	lncRNA gene	Chr15:49303922-49308561 (+)
A/J	ENSMUSG00195005777	lncRNA gene	Chr15:49312541-49317178 (+)
AKR/J	ENSMUSG00220018311	lncRNA gene	Chr15:49306914-49311549 (+)
BALB/cJ	ENSMUSG00180004834	lncRNA gene	Chr15:49272132-49276771 (+)
C3H/HeJ	ENSMUSG00175020731	lncRNA gene	Chr15:49491519-49496123 (+)
C57BL/6NJ	ENSMUSG00215003271	lncRNA gene	Chr15:49266640-49271282 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014284	lncRNA gene	Chr15:49161462-49166086 (+)
CBA/J	ENSMUSG00210026610	lncRNA gene	Chr15:49372608-49377212 (+)
DBA/2J	ENSMUSG00185013343	lncRNA gene	Chr15:49343883-49348487 (+)
FVB/NJ	ENSMUSG00205015452	lncRNA gene	Chr15:49160138-49164744 (+)
JF1/MsJ	ENSUMUG00000023965	lncRNA gene	Chr15:49185323-49189925 (+)
LP/J	ENSMUSG00230008799	lncRNA gene	Chr15:52664709-52669346 (+)
NOD/ShiLtJ	ENSMUSG00190008472	lncRNA gene	Chr15:49321327-49325954 (+)
NZO/HlLtJ	ENSMUSG00225028812	lncRNA gene	Chr15:52977933-52982576 (+)
PWK/PhJ	ENSLUMG00010012383	lncRNA gene	Chr15:49414917-49419529 (+)
SPRET/EiJ	ENSMSPG00010007119	lncRNA gene	Chr15:50406897-50411555 (+)
WSB/EiJ	ENSIUOG00005021469	lncRNA gene	Chr15:49373579-49378179 (+)

Homology

• Gene Tree
  Gm41322
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm41322
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  3

• Ensembl
  ENSMUSG00000115241 (Evidence)
• NCBI Gene
  105245950

Representative Sequences			Length	Strain/Species
genomic	105245950	NCBI Gene Model | MGI Sequence Detail	4648	C57BL/6J
transcript	XR_001781601	RefSeq | MGI Sequence Detail	516	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17