Gm41293 Gene Detail

Summary

• Symbol
  Gm41293
• Name
  predicted gene, 41293

• Feature Type
  lncRNA gene
• IDs
  MGI:5624178
  NCBI Gene: 105245913
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:36206520-36210851 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  245 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624178	lncRNA gene	Chr15:36205844-36211250 (-)
129S1/SvImJ	ENSMUSG00200027375	lncRNA gene	Chr15:33227522-33232076 (-)
A/J	ENSMUSG00195035760	lncRNA gene	Chr15:33144614-33148946 (-)
AKR/J	ENSMUSG00220032255	lncRNA gene	Chr15:33058533-33062864 (-)
BALB/cJ	ENSMUSG00180032207	lncRNA gene	Chr15:33106845-33111177 (-)
C3H/HeJ	ENSMUSG00175027149	lncRNA gene	Chr15:33311040-33315371 (-)
C57BL/6NJ	ENSMUSG00215025269	lncRNA gene	Chr15:33118900-33123231 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010809	lncRNA gene	Chr15:33148709-33153248 (-)
CBA/J	ENSMUSG00210018213	lncRNA gene	Chr15:33221525-33225856 (-)
DBA/2J	ENSMUSG00185034595	lncRNA gene	Chr15:33206327-33210661 (-)
FVB/NJ	ENSMUSG00205035963	lncRNA gene	Chr15:33116060-33120393 (-)
JF1/MsJ	ENSUMUG00000034805	lncRNA gene	Chr15:33102986-33107542 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190030901	lncRNA gene	Chr15:33189311-33193865 (-)
NZO/HlLtJ	ENSMUSG00225032075	lncRNA gene	Chr15:36897951-36902281 (-)
PWK/PhJ	ENSLUMG00010032180	lncRNA gene	Chr15:33280723-33285305 (-)
SPRET/EiJ	ENSMSPG00010012922	lncRNA gene	Chr15:33905905-33910372 (-)
WSB/EiJ	ENSIUOG00005033002	lncRNA gene	Chr15:33231310-33235656 (-)

Homology

• Gene Tree
  Gm41293
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm41293
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000115811 (Evidence)
• NCBI Gene
  105245913

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115811	Ensembl Gene Model | MGI Sequence Detail	4332	C57BL/6J
transcript	ENSMUST00000227302	Ensembl | MGI Sequence Detail	707	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17