Gm41276 Gene Detail

Summary

• Symbol
  Gm41276
• Name
  predicted gene, 41276

• Feature Type
  lncRNA gene
• IDs
  MGI:5624161
  NCBI Gene: 105245895
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:16489101-16496928 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  327 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624161	lncRNA gene	Chr15:16489099-16496939 (-)
129S1/SvImJ	ENSMUSG00200004354	lncRNA gene	Chr15:13514021-13521820 (-)
A/J	ENSMUSG00195011610	lncRNA gene	Chr15:13392089-13399886 (-)
AKR/J	ENSMUSG00220001702	lncRNA gene	Chr15:13312342-13320139 (-)
BALB/cJ	ENSMUSG00180009925	lncRNA gene	Chr15:13400309-13408106 (-)
C3H/HeJ	ENSMUSG00175001986	lncRNA gene	Chr15:13559457-13567254 (-)
C57BL/6NJ	ENSMUSG00215008915	lncRNA gene	Chr15:13427218-13435015 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002652	lncRNA gene	Chr15:13521313-13529111 (-)
CBA/J	ENSMUSG00210004847	lncRNA gene	Chr15:13551103-13558900 (-)
DBA/2J	ENSMUSG00185003476	lncRNA gene	Chr15:13500213-13508010 (-)
FVB/NJ	ENSMUSG00205010629	lncRNA gene	Chr15:13370150-13377947 (-)
JF1/MsJ	ENSUMUG00000014369	lncRNA gene	Chr15:13556972-13564752 (-)
LP/J	ENSMUSG00230016380	lncRNA gene	Chr15:16988477-16996276 (-)
NOD/ShiLtJ	ENSMUSG00190002049	lncRNA gene	Chr15:13448596-13456393 (-)
NZO/HlLtJ	ENSMUSG00225024275	lncRNA gene	Chr15:17188642-17196439 (-)
PWK/PhJ	ENSLUMG00010015060	lncRNA gene	Chr15:13649809-13657596 (-)
SPRET/EiJ	ENSMSPG00010001036	lncRNA gene	Chr15:13838094-13845881 (-)
WSB/EiJ	ENSIUOG00005012057	lncRNA gene	Chr15:13473587-13481392 (-)

Homology

• Gene Tree
  Gm41276
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000115614 (Evidence)
• NCBI Gene
  105245895

Representative Sequences			Length	Strain/Species
genomic	105245895	NCBI Gene Model | MGI Sequence Detail	7828	C57BL/6J
transcript	XR_875051	RefSeq | MGI Sequence Detail	430	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;