Gm41271 Gene Detail

Summary

• Symbol
  Gm41271
• Name
  predicted gene, 41271

• Feature Type
  lncRNA gene
• IDs
  MGI:5624156
  NCBI Gene: 105245890
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:11696896-11703789 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  320 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624156	lncRNA gene	Chr15:11696853-11712859 (-)
129S1/SvImJ	ENSMUSG00200034202	lncRNA gene	Chr15:8694322-8700081 (-)
A/J	ENSMUSG00195010532	lncRNA gene	Chr15:8580682-8587569 (-)
AKR/J	ENSMUSG00220022725	lncRNA gene	Chr15:8515559-8522452 (-)
BALB/cJ	ENSMUSG00180036654	lncRNA gene	Chr15:8586408-8593302 (-)
C3H/HeJ	ENSMUSG00175034259	lncRNA gene	Chr15:8743616-8750509 (-)
C57BL/6NJ	ENSMUSG00215026839	lncRNA gene	Chr15:8629306-8636200 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025614	lncRNA gene	Chr15:8722142-8729014 (-)
CBA/J	ENSMUSG00210025556	lncRNA gene	Chr15:8728681-8735575 (-)
DBA/2J	ENSMUSG00185032579	lncRNA gene	Chr15:8685733-8692626 (-)
FVB/NJ	ENSMUSG00205030754	lncRNA gene	Chr15:8561721-8568608 (-)
JF1/MsJ	ENSUMUG00000036177	lncRNA gene	Chr15:8802931-8809840 (-)
LP/J	ENSMUSG00230016289	lncRNA gene	Chr15:12187366-12193125 (-)
NOD/ShiLtJ	ENSMUSG00190010487	lncRNA gene	Chr15:8665251-8671011 (-)
NZO/HlLtJ	ENSMUSG00225024204	lncRNA gene	Chr15:12406835-12413728 (-)
PWK/PhJ	ENSLUMG00010035645	lncRNA gene	Chr15:8861642-8868568 (-)
SPRET/EiJ	ENSMSPG00010033195	lncRNA gene	Chr15:8898016-8904618 (-)
WSB/EiJ	ENSIUOG00005030777	lncRNA gene	Chr15:8649939-8656832 (-)

Homology

• Gene Tree
  Gm41271
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000115585 (Evidence)
• NCBI Gene
  105245890

Representative Sequences			Length	Strain/Species
genomic	105245890	NCBI Gene Model | MGI Sequence Detail	6894	C57BL/6J
transcript	XR_875039	RefSeq | MGI Sequence Detail	1933	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;