Gm41244 Gene Detail

Summary

• Symbol
  Gm41244
• Name
  predicted gene, 41244

• Feature Type
  lncRNA gene
• IDs
  MGI:5624129
  NCBI Gene: 105245855
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:115004093-115083522 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2598 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624129	lncRNA gene	Chr14:114920082-115083678 (-)
129S1/SvImJ	ENSMUSG00200024777	lncRNA gene	Chr14:103895498-103976932 (-)
A/J	ENSMUSG00195031246	lncRNA gene	Chr14:103655331-103731550 (-)
AKR/J	ENSMUSG00220007837	lncRNA gene	Chr14:103433300-103509499 (-)
BALB/cJ	ENSMUSG00180029205	lncRNA gene	Chr14:103147564-103223756 (-)
C3H/HeJ	ENSMUSG00175006019	lncRNA gene	Chr14:105083335-105159522 (-)
C57BL/6NJ	ENSMUSG00215029158	lncRNA gene	Chr14:103264006-103340204 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007208	lncRNA gene	Chr14:104776210-104850736 (-)
CBA/J	ENSMUSG00210027142	lncRNA gene	Chr14:104051991-104128204 (-)
DBA/2J	ENSMUSG00185021561	lncRNA gene	Chr14:109208360-109284556 (-)
FVB/NJ	ENSMUSG00205007853	lncRNA gene	Chr14:102762218-102841743 (-)
JF1/MsJ	ENSUMUG00000012404	lncRNA gene	Chr14:120267843-120342078 (-)
LP/J	ENSMUSG00230002009	lncRNA gene	Chr14:121196906-121278340 (-)
NOD/ShiLtJ	ENSMUSG00190025947	lncRNA gene	Chr14:103840881-103918536 (-)
NZO/HlLtJ	ENSMUSG00225021891	lncRNA gene	Chr14:111199620-111281054 (-)
PWK/PhJ	ENSLUMG00010029457	lncRNA gene	Chr14:103122924-103197025 (-)
SPRET/EiJ	ENSMSPG00010012396	lncRNA gene	Chr14:107281268-107363087 (-)
WSB/EiJ	ENSIUOG00005031117	lncRNA gene	Chr14:103042441-103116846 (-)

Homology

• Gene Tree
  Gm41244
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm41244
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  43
• RefSeq
  1

• Ensembl
  ENSMUSG00000120119 (Evidence)
• NCBI Gene
  105245855

Representative Sequences			Length	Strain/Species
genomic	105245855	NCBI Gene Model | MGI Sequence Detail	79430	C57BL/6J
transcript	XR_874953	RefSeq | MGI Sequence Detail	661	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm41244:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr130192	Chr14:115079965-115079972 (-)	3,553 bp