Gm41138 Gene Detail

Summary

• Symbol
  Gm41138
• Name
  predicted gene, 41138

• Feature Type
  lncRNA gene
• IDs
  MGI:5624023
  NCBI Gene: 105245739
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:44035370-44038224 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  225 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624023	lncRNA gene	Chr14:44035370-44038224 (-)
129S1/SvImJ	ENSMUSG00200017434	lncRNA gene	Chr14:33141727-33144029 (+)
A/J	ENSMUSG00195031497	lncRNA gene	Chr14:46058-48360 (-)
AKR/J	ENSMUSG00220030363	lncRNA gene	Chr14:41802395-41804697 (-)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175032106	lncRNA gene	Chr14:34819847-34822149 (+)
C57BL/6NJ	ENSMUSG00215039229	lncRNA gene	Chr14:33437131-33439433 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210046124	lncRNA gene	Chr14:33803482-33805784 (-)
DBA/2J	ENSMUSG00185015602	lncRNA gene	Chr14:38224577-38226879 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000033842	lncRNA gene	Chr14:46274996-46277299 (-)
JF1/MsJ	ENSUMUG00000040532	lncRNA gene	Chr14:46454734-46456993 (+)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010003384	lncRNA gene	Chr14:35652666-35654958 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm41138
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm41138
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000115659 (Evidence)
• NCBI Gene
  105245739

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115659	Ensembl Gene Model | MGI Sequence Detail	2855	C57BL/6J
transcript	ENSMUST00000227217	Ensembl | MGI Sequence Detail	1443	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;