Gm41032 Gene Detail

Summary

• Symbol
  Gm41032
• Name
  predicted gene, 41032

• Feature Type
  lncRNA gene
• IDs
  MGI:5623917
  NCBI Gene: 105245601
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:98666612-98672673 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  263 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5623917	lncRNA gene	Chr13:98664709-98672673 (-)
129S1/SvImJ	ENSMUSG00200008937	lncRNA gene	Chr13:93226773-93232612 (-)
A/J	ENSMUSG00195029401	lncRNA gene	Chr13:93716347-93722182 (-)
AKR/J	ENSMUSG00220029689	lncRNA gene	Chr13:92202553-92208396 (-)
BALB/cJ	ENSMUSG00180038997	lncRNA gene	Chr13:94256436-94262273 (-)
C3H/HeJ	ENSMUSG00175017531	lncRNA gene	Chr13:94423326-94429165 (-)
C57BL/6NJ	ENSMUSG00215030412	lncRNA gene	Chr13:94317199-94323034 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011675	lncRNA gene	Chr13:93528583-93534421 (-)
CBA/J	ENSMUSG00210012016	lncRNA gene	Chr13:93743162-93749008 (-)
DBA/2J	ENSMUSG00185020407	lncRNA gene	Chr13:97403909-97409753 (-)
FVB/NJ	ENSMUSG00205036895	lncRNA gene	Chr13:93210560-93216396 (-)
JF1/MsJ	ENSUMUG00000033499	lncRNA gene	Chr13:97086120-97092002 (-)
LP/J	ENSMUSG00230037380	lncRNA gene	Chr13:107412025-107417862 (-)
NOD/ShiLtJ	ENSMUSG00190042007	lncRNA gene	Chr13:94086563-94092400 (-)
NZO/HlLtJ	ENSMUSG00225033611	lncRNA gene	Chr13:99936479-99942316 (-)
PWK/PhJ	ENSLUMG00010026157	lncRNA gene	Chr13:93188218-93194047 (-)
SPRET/EiJ	ENSMSPG00010009413	lncRNA gene	Chr13:94468880-94474781 (-)
WSB/EiJ	ENSIUOG00005035812	lncRNA gene	Chr13:93091029-93096874 (-)

Homology

• Gene Tree
  Gm41032
  

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000120268 (Evidence)
• NCBI Gene
  105245601

Representative Sequences			Length	Strain/Species
genomic	105245601	NCBI Gene Model | MGI Sequence Detail	6062	C57BL/6J
transcript	XR_873844	RefSeq | MGI Sequence Detail	2512	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm41032:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr123627	Chr13:98672400-98672426 (-)	260 bp