Gm40932 Gene Detail

Summary

• Symbol
  Gm40932
• Name
  predicted gene, 40932

• Feature Type
  lncRNA gene
• IDs
  MGI:5623817
  NCBI Gene: 105245484
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:45260427-45271360 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  495 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5623817	lncRNA gene	Chr13:45253433-45271360 (+)
129S1/SvImJ	ENSMUSG00200036801	lncRNA gene	Chr13:42501529-42518035 (+)
A/J	ENSMUSG00195030778	lncRNA gene	Chr13:41561674-41578178 (+)
AKR/J	ENSMUSG00220009471	lncRNA gene	Chr13:41368871-41386644 (+)
BALB/cJ	ENSMUSG00180008866	lncRNA gene	Chr13:41868211-41884715 (+)
C3H/HeJ	ENSMUSG00175031459	lncRNA gene	Chr13:41832524-41849032 (+)
C57BL/6NJ	ENSMUSG00215007443	lncRNA gene	Chr13:41997187-42014960 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031812	lncRNA gene	Chr13:41901029-41918731 (+)
CBA/J	ENSMUSG00210028692	lncRNA gene	Chr13:41838059-41854563 (+)
DBA/2J	ENSMUSG00185033222	lncRNA gene	Chr13:42652272-42670045 (+)
FVB/NJ	ENSMUSG00205013363	lncRNA gene	Chr13:41589967-41606471 (+)
JF1/MsJ	ENSUMUG00000018123	lncRNA gene	Chr13:42188805-42206553 (+)
LP/J	ENSMUSG00230030399	lncRNA gene	Chr13:51970364-51986868 (+)
NOD/ShiLtJ	ENSMUSG00190012795	lncRNA gene	Chr13:42051201-42068976 (+)
NZO/HlLtJ	ENSMUSG00225036279	lncRNA gene	Chr13:45737517-45755290 (+)
PWK/PhJ	ENSLUMG00010021899	lncRNA gene	Chr13:41025561-41042065 (+)
SPRET/EiJ	ENSMSPG00010032710	lncRNA gene	Chr13:41107397-41125153 (+)
WSB/EiJ	ENSIUOG00005028220	lncRNA gene	Chr13:41173901-41191670 (+)

Homology

• Gene Tree
  Gm40932
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm40932
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000113553 (Evidence)
• NCBI Gene
  105245484

Representative Sequences			Length	Strain/Species
genomic	105245484	NCBI Gene Model | MGI Sequence Detail	10934	C57BL/6J
transcript	AK033041	GenBank | ENA | DDBJ | MGI Sequence Detail	512	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69