Gm40810 Pseudogene Detail

Summary

• Symbol
  Gm40810
• Name
  predicted gene, 40810

• Feature Type
  pseudogene
• IDs
  MGI:5623695
  NCBI Gene: 105245337
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:113565955-113566207 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5623695	pseudogene	Chr10:113565950-113566214 (-)
129S1/SvImJ	ENSMUSG00200011478	pseudogene	Chr10:109984405-109984657 (-)
A/J	ENSMUSG00195008633	pseudogene	Chr10:110403396-110403648 (-)
AKR/J	ENSMUSG00220025906	pseudogene	Chr10:109982791-109983043 (-)
BALB/cJ	ENSMUSG00180024766	pseudogene	Chr10:110420541-110420793 (-)
C3H/HeJ	ENSMUSG00175015989	pseudogene	Chr10:110349685-110349937 (-)
C57BL/6NJ	ENSMUSG00215013007	pseudogene	Chr10:110066575-110066827 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011626	pseudogene	Chr10:109380683-109380950 (-)
CBA/J	ENSMUSG00210011813	pseudogene	Chr10:110220323-110220575 (-)
DBA/2J	ENSMUSG00185025525	pseudogene	Chr10:110335224-110335476 (-)
FVB/NJ	ENSMUSG00205010935	pseudogene	Chr10:109663297-109663549 (-)
JF1/MsJ	ENSUMUG00000011681	pseudogene	Chr10:111645737-111645989 (-)
LP/J	ENSMUSG00230026576	pseudogene	Chr10:112294897-112295149 (-)
NOD/ShiLtJ	ENSMUSG00190021768	pseudogene	Chr10:110451054-110451306 (-)
NZO/HlLtJ	ENSMUSG00225018370	pseudogene	Chr10:116549223-116549475 (-)
PWK/PhJ	ENSLUMG00010014400	pseudogene	Chr10:110034440-110034692 (-)
SPRET/EiJ	ENSMSPG00010017425	pseudogene	Chr10:111935408-111935675 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm40810
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm40810
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000112438 (Evidence)
• NCBI Gene
  105245337

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112438	Ensembl Gene Model | MGI Sequence Detail	253	C57BL/6J
transcript	ENSMUST00000219149	Ensembl | MGI Sequence Detail	253	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87