Gm40761 Gene Detail

Summary

• Symbol
  Gm40761
• Name
  predicted gene, 40761

• Feature Type
  lncRNA gene
• IDs
  MGI:5623646
  NCBI Gene: 105245285
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:111172985-111183096 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  486 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5623646	lncRNA gene	Chr10:111167624-111183096 (+)
129S1/SvImJ	ENSMUSG00200011439	lncRNA gene	Chr10:107590881-107600915 (+)
A/J	ENSMUSG00195008485	lncRNA gene	Chr10:108006286-108016344 (+)
AKR/J	ENSMUSG00220025032	lncRNA gene	Chr10:107587652-107597723 (+)
BALB/cJ	ENSMUSG00180025261	lncRNA gene	Chr10:108025782-108035837 (+)
C3H/HeJ	ENSMUSG00175016132	lncRNA gene	Chr10:107954203-107964249 (+)
C57BL/6NJ	ENSMUSG00215012560	lncRNA gene	Chr10:107677128-107687189 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011670	lncRNA gene	Chr10:107050901-107060938 (+)
CBA/J	ENSMUSG00210011703	lncRNA gene	Chr10:107825582-107835632 (+)
DBA/2J	ENSMUSG00185024755	lncRNA gene	Chr10:107954214-107964244 (+)
FVB/NJ	ENSMUSG00205011649	lncRNA gene	Chr10:107448949-107458997 (+)
JF1/MsJ	ENSUMUG00000010328	lncRNA gene	Chr10:109275271-109285308 (+)
LP/J	ENSMUSG00230013204	lncRNA gene	Chr10:109900163-109910215 (+)
NOD/ShiLtJ	ENSMUSG00190020706	lncRNA gene	Chr10:108053252-108063309 (+)
NZO/HlLtJ	ENSMUSG00225017810	lncRNA gene	Chr10:114154458-114164522 (+)
PWK/PhJ	ENSLUMG00010014025	lncRNA gene	Chr10:107660075-107670148 (+)
SPRET/EiJ	ENSMSPG00010005666	lncRNA gene	Chr10:109471660-109481444 (+)
WSB/EiJ	ENSIUOG00005010861	lncRNA gene	Chr10:107723238-107733306 (+)

Homology

• Gene Tree
  Gm40761
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm40761
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2

• Ensembl
  ENSMUSG00000112246 (Evidence)
• NCBI Gene
  105245285

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112246	Ensembl Gene Model | MGI Sequence Detail	10112	C57BL/6J
transcript	ENSMUST00000219123	Ensembl | MGI Sequence Detail	1189	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87