Gm40193 Gene Detail

Summary

• Symbol
  Gm40193
• Name
  predicted gene, 40193
• Synonyms
  Gm45573

• Feature Type
  protein coding gene
• IDs
  MGI:5623078
  NCBI Gene: 105244603
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:70423058-70423765 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5623078	protein coding gene	Chr11:70422952-70427779 (-)
129S1/SvImJ	ENSMUSG00200043392	protein coding gene	Chr11:67370113-67370820 (-)
A/J	ENSMUSG00195040442	protein coding gene	Chr11:67396656-67397363 (-)
AKR/J	ENSMUSG00220054035	protein coding gene	Chr11:67505776-67506483 (-)
BALB/cJ	ENSMUSG00180037285	protein coding gene	Chr11:67465173-67465880 (-)
C3H/HeJ	ENSMUSG00175053213	protein coding gene	Chr11:67415366-67416073 (-)
C57BL/6NJ	ENSMUSG00215052664	protein coding gene	Chr11:67192537-67193244 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005047418	protein coding gene	Chr11:66959026-66959731 (-)
CBA/J	ENSMUSG00210054224	protein coding gene	Chr11:67269448-67270155 (-)
DBA/2J	ENSMUSG00185052863	protein coding gene	Chr11:67504425-67505130 (-)
FVB/NJ	ENSMUSG00205051607	protein coding gene	Chr11:67362615-67363320 (-)
JF1/MsJ	ENSUMUG00000056487	protein coding gene	Chr11:67902967-67903672 (-)
LP/J	ENSMUSG00230052229	protein coding gene	Chr11:68580423-68581130 (-)
NOD/ShiLtJ	ENSMUSG00190053486	protein coding gene	Chr11:67499307-67500014 (-)
NZO/HlLtJ	ENSMUSG00225044546	protein coding gene	Chr11:70761859-70762566 (-)
PWK/PhJ	ENSLUMG00010053244	protein coding gene	Chr11:67371873-67372578 (-)
SPRET/EiJ	ENSMSPG00010041848	protein coding gene	Chr11:68104220-68104930 (-)
WSB/EiJ	ENSIUOG00005039174	protein coding gene	Chr11:67394678-67395385 (-)

Homology

• Human Ortholog
  C17orf114, chromosome 17 open reading frame 114

• Vertebrate Orthologs
  2

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  C17orf114, chromosome 17 open reading frame 114
  
• Links
  HGNC:55343

  NCBI Gene ID: 119139905

  UniProt: A0A1B0GUV1

  
  
• Chr Location
  17p13.2; chr17:4801159-4807013 (-)  GRCh38

---

• MGI Vertebrate Homology
  Gm40193 stringent orthology
  1 human;1 mouse;1 rat
  
• HCOP
  vertebrate homology predictions: C17orf114
• Gene Tree
  Gm40193
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm40193
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  3
• UniProt
  1

• Ensembl
  ENSMUSG00000109833 (Evidence)
• NCBI Gene
  105244603

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109833	Ensembl Gene Model | MGI Sequence Detail	708	C57BL/6J
transcript	ENSMUST00000209971	Ensembl | MGI Sequence Detail	237	Not Applicable
polypeptide	ENSMUSP00000148188	Ensembl | MGI Sequence Detail	78	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR062328 Uncharacterised protein C17orf114

Other
Accession IDs

MGI:5791409

References

• Summaries
  All 11

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14