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Gm40038 Gene Detail
Summary
  • Symbol
    Gm40038
  • Name
    predicted gene, 40038
  • Synonyms
    Gm42784
Location &
Maps
more
  • Sequence Map
    Chr3:41112486-41127895 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    547 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5622923
 lncRNA gene Chr3:41087814-41136898 (-)
129S1/SvImJ ENSMUSG00200006611
 lncRNA gene Chr3:37861084-37870702 (-)
A/J ENSMUSG00195001494
 lncRNA gene Chr3:37845467-37855085 (-)
AKR/J ENSMUSG00220000701
 lncRNA gene Chr3:37927378-37936993 (-)
BALB/cJ ENSMUSG00180002683
 lncRNA gene Chr3:37972567-37982185 (-)
C3H/HeJ ENSMUSG00175003449
 lncRNA gene Chr3:37843351-37852969 (-)
C57BL/6NJ ENSMUSG00215001511
 lncRNA gene Chr3:38255112-38264727 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005612
 lincRNA gene Chr3:35721749-35734144 (-)
CAST/EiJ ENSTCUG00005001313
 lncRNA gene Chr3:37708772-37719341 (-)
CBA/J ENSMUSG00210001915
 lncRNA gene Chr3:37938793-37948409 (-)
DBA/2J ENSMUSG00185001502
 lncRNA gene Chr3:38135328-38144946 (-)
FVB/NJ ENSMUSG00205000857
 lncRNA gene Chr3:37254657-37264274 (-)
JF1/MsJ ENSUMUG00000001280
 lncRNA gene Chr3:37639011-37648931 (-)
LP/J ENSMUSG00230023943
 lncRNA gene Chr3:40102047-40111667 (-)
NOD/ShiLtJ ENSMUSG00190001729
 lncRNA gene Chr3:38192633-38202250 (-)
NZO/HlLtJ ENSMUSG00225000887
 lncRNA gene Chr3:42723004-42732622 (-)
PWK/PhJ ENSLUMG00010000889
 lncRNA gene Chr3:37679094-37689029 (-)
SPRET/EiJ ENSMSPG00010000710
 lncRNA gene Chr3:38121740-38131343 (-)
WSB/EiJ ENSIUOG00005014509
 lncRNA gene Chr3:38111287-38120918 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    34
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 105244429 NCBI Gene Model | MGI Sequence Detail 15410 C57BL/6J ±  kb
transcript AK052977 GenBank | ENA | DDBJ | MGI Sequence Detail 1370 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
Other
Accession IDs
less
MGI:5662921
References
more
  • Summaries
    All 12
    Phenotypes 5
  • Earliest
    J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
  • Latest
    J:157707 Puligilla C, et al., Sox2 induces neuronal formation in the developing mammalian cochlea. J Neurosci. 2010 Jan 13;30(2):714-22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory