Gm39774 Gene Detail

Summary

• Symbol
  Gm39774
• Name
  predicted gene, 39774

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:5622659
  NCBI Gene: 105244100
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:26672167-26677275 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  211 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5622659	protein coding gene	Chr2:26672167-26724826 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195047411	protein coding gene	Chr2:23734015-23738883 (-)
AKR/J	ENSMUSG00220050409	protein coding gene	Chr2:23851795-23856666 (-)
BALB/cJ	ENSMUSG00180049788	protein coding gene	Chr2:23753064-23757910 (-)
C3H/HeJ	ENSMUSG00175046249	protein coding gene	Chr2:23722443-23727293 (-)
C57BL/6NJ	ENSMUSG00215044267	protein coding gene	Chr2:23781214-23786065 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210017443	protein coding gene	Chr2:23756096-23760946 (-)
DBA/2J	ENSMUSG00185051507	protein coding gene	Chr2:23648110-23652976 (-)
FVB/NJ	ENSMUSG00205036984	protein coding gene	Chr2:23506516-23511375 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230040631	protein coding gene	Chr2:25573663-25578517 (-)
NOD/ShiLtJ	ENSMUSG00190043889	protein coding gene	Chr2:23746474-23751330 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm39774
  

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000134365 (Evidence)
• NCBI Gene
  105244100

Representative Sequences			Length	Strain/Species
genomic	105244100	NCBI Gene Model | MGI Sequence Detail	5109	C57BL/6J
transcript	NM_001359165	RefSeq | MGI Sequence Detail	819	ZRU/MplStud
polypeptide	NP_001346094	RefSeq | MGI Sequence Detail	193	ZRU/MplStud

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR012674 Calycin superfamily

References

• Summaries
  All 5
• Earliest
  J:228783 Ibarra-Soria X, et al., The olfactory transcriptomes of mice. PLoS Genet. 2014 Sep;10(9):e1004593