Gm39232 Gene Detail

Summary

• Symbol
  Gm39232
• Name
  predicted gene, 39232
• Synonyms
  Gm45595

• Feature Type
  lncRNA gene
• IDs
  MGI:5622117
  NCBI Gene: 105243264
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:101443730-101452953 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  536 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5622117	lncRNA gene	Chr8:101388539-101453004 (-)
129S1/SvImJ	ENSMUSG00200015249	lncRNA gene	Chr8:95690010-95754424 (-)
A/J	ENSMUSG00195004180	lncRNA gene	Chr8:96082035-96146462 (-)
AKR/J	ENSMUSG00220012012	lncRNA gene	Chr8:96149536-96213955 (-)
BALB/cJ	ENSMUSG00180004317	lncRNA gene	Chr8:95992008-96056410 (-)
C3H/HeJ	ENSMUSG00175002811	lncRNA gene	Chr8:96075498-96139837 (-)
C57BL/6NJ	ENSMUSG00215001345	lncRNA gene	Chr8:95665872-95730316 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024276	lncRNA gene	Chr8:95451469-95528208 (-)
CBA/J	ENSMUSG00210015436	lncRNA gene	Chr8:96004096-96068430 (-)
DBA/2J	ENSMUSG00185005785	lncRNA gene	Chr8:102111853-102176198 (-)
FVB/NJ	ENSMUSG00205017533	lncRNA gene	Chr8:95049774-95114127 (-)
JF1/MsJ	ENSUMUG00000016800	lncRNA gene	Chr8:104446216-104510562 (-)
LP/J	ENSMUSG00230008431	lncRNA gene	Chr8:105758990-105823476 (-)
NOD/ShiLtJ	ENSMUSG00190013945	lncRNA gene	Chr8:96144204-96208557 (-)
NZO/HlLtJ	ENSMUSG00225011741	lncRNA gene	Chr8:109143245-109207592 (-)
PWK/PhJ	ENSLUMG00010004359	lncRNA gene	Chr8:95906579-95979901 (-)
SPRET/EiJ	ENSMSPG00010006627	lncRNA gene	Chr8:98018671-98093370 (-)
WSB/EiJ	ENSIUOG00005006091	lncRNA gene	Chr8:96809909-96874381 (-)

Homology

• Gene Tree
  Gm39232
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  1

• Ensembl
  ENSMUSG00000109769 (Evidence)
• NCBI Gene
  105243264

Representative Sequences			Length	Strain/Species
genomic	105243264	NCBI Gene Model | MGI Sequence Detail	9224	C57BL/6J
transcript	XR_879130	RefSeq | MGI Sequence Detail	239	C57BL/6J

Other
Accession IDs

MGI:5791431

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;