Gm38804 Gene Detail

Summary

• Symbol
  Gm38804
• Name
  predicted gene, 38804
• Synonyms
  Gm44119

• Feature Type
  lncRNA gene
• IDs
  MGI:5621689
  NCBI Gene: 105242648
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:48586711-48591348 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  223 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5621689	lncRNA gene	Chr6:48586711-48599291 (-)
129S1/SvImJ	ENSMUSG00200005521	lncRNA gene	Chr6:45496525-45504909 (-)
A/J	ENSMUSG00195006826	lncRNA gene	Chr6:45267509-45275897 (-)
AKR/J	ENSMUSG00220004646	lncRNA gene	Chr6:44977043-44985462 (-)
BALB/cJ	ENSMUSG00180027449	lncRNA gene	Chr6:45580456-45588875 (-)
C3H/HeJ	ENSMUSG00175018680	lncRNA gene	Chr6:45342092-45350511 (-)
C57BL/6NJ	ENSMUSG00215010776	lncRNA gene	Chr6:45541581-45549965 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003853	antisense lncRNA gene	Chr6:43033438-43041837 (-)
CAST/EiJ	ENSTCUG00005005132	lncRNA gene	Chr6:44858954-44864968 (-)
CBA/J	ENSMUSG00210018383	lncRNA gene	Chr6:45386944-45395363 (-)
DBA/2J	ENSMUSG00185014390	lncRNA gene	Chr6:45968634-45977053 (-)
FVB/NJ	ENSMUSG00205035616	lncRNA gene	Chr6:45633088-45641507 (-)
JF1/MsJ	ENSUMUG00000016190	lncRNA gene	Chr6:45331696-45340070 (-)
LP/J	ENSMUSG00230020382	lncRNA gene	Chr6:46993642-47002026 (-)
NOD/ShiLtJ	ENSMUSG00190035399	lncRNA gene	Chr6:45306737-45315125 (-)
NZO/HlLtJ	ENSMUSG00225019801	lncRNA gene	Chr6:49030193-49038577 (-)
PWK/PhJ	ENSLUMG00010020911	lncRNA gene	Chr6:44966126-44974494 (-)
SPRET/EiJ	ENSMSPG00010010400	lncRNA gene	Chr6:45592617-45601043 (-)
WSB/EiJ	ENSIUOG00005028982	lncRNA gene	Chr6:45604848-45613239 (-)

Homology

• Gene Tree
  Gm38804
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2

• Ensembl
  ENSMUSG00000107640 (Evidence)
• NCBI Gene
  105242648

Representative Sequences			Length	Strain/Species
genomic	105242648	NCBI Gene Model | MGI Sequence Detail	4638	C57BL/6J
transcript	XR_003956301	RefSeq | MGI Sequence Detail	3132	C57BL/6J

Other
Accession IDs

MGI:5690511

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;