Gm38695 Gene Detail

Summary

• Symbol
  Gm38695
• Name
  predicted gene, 38695
• Synonyms
  Gm35234

• Feature Type
  lncRNA gene
• IDs
  MGI:5621580
  NCBI Gene: 102638742
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:59958503-59988534 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1116 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5621580	lncRNA gene	Chr18:59958503-59997793 (-)
129S1/SvImJ	ENSMUSG00200034758	lncRNA gene	Chr18:57080315-57110148 (-)
A/J	ENSMUSG00195005534	lncRNA gene	Chr18:57185758-57216128 (-)
AKR/J	ENSMUSG00220016527	lncRNA gene	Chr18:57160587-57190984 (-)
BALB/cJ	ENSMUSG00180012962	lncRNA gene	Chr18:57757407-57787781 (-)
C3H/HeJ	ENSMUSG00175036503	lncRNA gene	Chr18:57370818-57400849 (-)
C57BL/6NJ	ENSMUSG00215039958	lncRNA gene	Chr18:56690633-56720667 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027439	lncRNA gene	Chr18:56532471-56568500 (-)
CBA/J	ENSMUSG00210032657	lncRNA gene	Chr18:57321665-57352027 (-)
DBA/2J	ENSMUSG00185016126	lncRNA gene	Chr18:57218039-57248081 (-)
FVB/NJ	ENSMUSG00205018067	lncRNA gene	Chr18:56573830-56604243 (-)
JF1/MsJ	ENSUMUG00000037867	lncRNA gene	Chr18:57093204-57123066 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190033479	lncRNA gene	Chr18:56965470-56995889 (-)
NZO/HlLtJ	ENSMUSG00225035397	lncRNA gene	Chr18:59080347-59110722 (-)
PWK/PhJ	ENSLUMG00010008480	lncRNA gene	Chr18:57229952-57260758 (-)
SPRET/EiJ	ENSMSPG00010019440	lncRNA gene	Chr18:57679734-57708986 (-)
WSB/EiJ	ENSIUOG00005009506	lncRNA gene	Chr18:56848046-56878418 (-)

Homology

• Gene Tree
  Gm38695
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000117701 (Evidence)
• NCBI Gene
  102638742

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117701	Ensembl Gene Model | MGI Sequence Detail	30032	C57BL/6J
transcript	ENSMUST00000237574	Ensembl | MGI Sequence Detail	705	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:5594393

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;