Gm38572 Gene Detail

Summary

• Symbol
  Gm38572
• Name
  predicted gene, 38572
• Synonyms
  Gm45304

• Feature Type
  lncRNA gene
• IDs
  MGI:5621457
  NCBI Gene: 102641740
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:32089006-32153944 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2197 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5621457	lncRNA gene	Chr8:32089006-32153979 (-)
129S1/SvImJ	ENSMUSG00200022648	lncRNA gene	Chr8:27168171-27233187 (-)
A/J	ENSMUSG00195006074	lncRNA gene	Chr8:27693812-27758374 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180005917	lncRNA gene	Chr8:27240797-27305352 (-)
C3H/HeJ	ENSMUSG00175007183	lncRNA gene	Chr8:27372109-27433559 (-)
C57BL/6NJ	ENSMUSG00215012592	lncRNA gene	Chr8:27155914-27220783 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025171	lncRNA gene	Chr8:27342289-27411507 (-)
CBA/J	ENSMUSG00210014665	lncRNA gene	Chr8:27222757-27287317 (-)
DBA/2J	ENSMUSG00185002468	lncRNA gene	Chr8:33146531-33208001 (-)
FVB/NJ	ENSMUSG00205004840	lncRNA gene	Chr8:26436215-26500762 (-)
JF1/MsJ	ENSUMUG00000009585	lncRNA gene	Chr8:34834669-34896688 (-)
LP/J	ENSMUSG00230015859	lncRNA gene	Chr8:36775846-36840873 (-)
NOD/ShiLtJ	ENSMUSG00190004871	lncRNA gene	Chr8:27275303-27339849 (-)
NZO/HlLtJ	ENSMUSG00225014991	lncRNA gene	Chr8:40369082-40433925 (-)
PWK/PhJ	ENSLUMG00010027538	lncRNA gene	Chr8:27097152-27160687 (-)
SPRET/EiJ	ENSMSPG00010017661	lncRNA gene	Chr8:27757499-27824572 (-)
WSB/EiJ	ENSIUOG00005011425	lncRNA gene	Chr8:27972722-28034168 (-)

Homology

• Gene Tree
  Gm38572
  

Expression

• Assay Results
  597
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000110329 (Evidence)
• NCBI Gene
  102641740

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110329	Ensembl Gene Model | MGI Sequence Detail	64939	C57BL/6J
transcript	ENSMUST00000210303	Ensembl | MGI Sequence Detail	2828	Not Applicable

Molecular
Reagents

• All nucleic 4

  cDNA 4

Other
Accession IDs

MGI:5791140

References

• Summaries
  All 7
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;