Gm38433 Pseudogene Detail

Summary

• Symbol
  Gm38433
• Name
  predicted gene, 38433

• Feature Type
  pseudogene
• IDs
  MGI:5621318
  NCBI Gene: 101055736
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:106420076-106420931 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5621318	pseudogene	Chr5:106386779-106420931 (+)
129S1/SvImJ	ENSMUSG00200006363	pseudogene	Chr5:100152956-100153811 (+)
A/J	ENSMUSG00195037287	pseudogene	Chr5:99614308-99615163 (+)
AKR/J	ENSMUSG00220040930	pseudogene	Chr5:99171524-99172379 (+)
BALB/cJ	ENSMUSG00180035298	pseudogene	Chr5:99766443-99767298 (+)
C3H/HeJ	ENSMUSG00175033051	pseudogene	Chr5:101805721-101806576 (+)
C57BL/6NJ	ENSMUSG00215028055	pseudogene	Chr5:99821893-99822748 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011711	pseudogene	Chr5:99168239-99169092 (+)
CAST/EiJ	ENSTCUG00005025547	pseudogene	Chr5:99032848-99033703 (+)
CBA/J	ENSMUSG00210034404	pseudogene	Chr5:100563319-100564174 (+)
DBA/2J	ENSMUSG00185047989	pseudogene	Chr5:103475973-103476828 (+)
FVB/NJ	ENSMUSG00205040939	pseudogene	Chr5:99492018-99492873 (+)
JF1/MsJ	ENSUMUG00000020015	pseudogene	Chr5:106519284-106520138 (+)
LP/J	ENSMUSG00230031790	pseudogene	Chr5:107694243-107695098 (+)
NOD/ShiLtJ	ENSMUSG00190028469	pseudogene	Chr5:99483073-99483928 (+)
NZO/HlLtJ	ENSMUSG00225026280	pseudogene	Chr5:115315956-115316811 (+)
PWK/PhJ	ENSLUMG00010016433	pseudogene	Chr5:98524206-98525060 (+)
SPRET/EiJ	ENSMSPG00010048404	pseudogene	Chr5:101606227-101607077 (+)
WSB/EiJ	ENSIUOG00005031532	pseudogene	Chr5:102202937-102203792 (+)

Homology

• Gene Tree
  Gm38433
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm38433
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000106669 (Evidence)
• NCBI Gene
  101055736

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106669	Ensembl Gene Model | MGI Sequence Detail	856	C57BL/6J
transcript	ENSMUST00000196978	Ensembl | MGI Sequence Detail	856	Not Applicable

References

• Summaries
  All 10

  Phenotypes 6
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17