Gm38432 Pseudogene Detail

Summary

• Symbol
  Gm38432
• Name
  predicted gene, 38432

• Feature Type
  pseudogene
• IDs
  MGI:5621317
  NCBI Gene: 100862097
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:19499022-19504855 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  385 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5621317	pseudogene	Chr18:19499017-19512964 (-)
129S1/SvImJ	ENSMUSG00200019956	pseudogene	Chr18:16522347-16528177 (-)
A/J	ENSMUSG00195002338	pseudogene	Chr18:16646658-16652488 (-)
AKR/J	ENSMUSG00220011922	pseudogene	Chr18:16691437-16697267 (-)
BALB/cJ	ENSMUSG00180004161	pseudogene	Chr18:17108193-17114023 (-)
C3H/HeJ	ENSMUSG00175004549	pseudogene	Chr18:16634423-16640253 (-)
C57BL/6NJ	ENSMUSG00215003579	pseudogene	Chr18:16347062-16352892 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014867	pseudogene	Chr18:16390294-16396115 (-)
CBA/J	ENSMUSG00210020693	pseudogene	Chr18:16660619-16666449 (-)
DBA/2J	ENSMUSG00185008397	pseudogene	Chr18:16627482-16633313 (-)
FVB/NJ	ENSMUSG00205016815	pseudogene	Chr18:16371540-16377372 (-)
JF1/MsJ	ENSUMUG00000026675	pseudogene	Chr18:16689765-16695612 (-)
LP/J	ENSMUSG00230012390	pseudogene	Chr18:18716490-18722320 (-)
NOD/ShiLtJ	ENSMUSG00190017636	pseudogene	Chr18:16442556-16448387 (-)
NZO/HlLtJ	ENSMUSG00225028223	pseudogene	Chr18:18623215-18629045 (-)
PWK/PhJ	ENSLUMG00010015806	pseudogene	Chr18:16865966-16871767 (-)
SPRET/EiJ	ENSMSPG00010004858	pseudogene	Chr18:16730188-16735676 (-)
WSB/EiJ	ENSIUOG00005019648	pseudogene	Chr18:16510828-16516638 (-)

Homology

• Gene Tree
  Gm38432
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000117636 (Evidence)
• NCBI Gene
  100862097

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117636	Ensembl Gene Model | MGI Sequence Detail	5834	C57BL/6J
transcript	ENSMUST00000234485	Ensembl | MGI Sequence Detail	990	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;