Gm38408 Gene Detail

Summary

• Symbol
  Gm38408
• Name
  predicted gene, 38408

• Feature Type
  lncRNA gene
• IDs
  MGI:5621293
  NCBI Gene: 328362
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:25067268-25169364 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2966 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5621293	lncRNA gene	Chr14:25067268-25169364 (-)
129S1/SvImJ	ENSMUSG00200015149	lncRNA gene	Chr14:16880774-16888320 (-)
A/J	ENSMUSG00195023423	lncRNA gene	Chr14:17950389-17957948 (-)
AKR/J	ENSMUSG00220028070	lncRNA gene	Chr14:17048323-17055881 (-)
BALB/cJ	ENSMUSG00180039409	lncRNA gene	Chr14:17042318-17049877 (-)
C3H/HeJ	ENSMUSG00175024873	lncRNA gene	Chr14:17108212-17115769 (-)
C57BL/6NJ	ENSMUSG00215036084	lncRNA gene	Chr14:17346889-17354431 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031971	lncRNA gene	Chr14:17207338-17214918 (-)
CBA/J	ENSMUSG00210027391	lncRNA gene	Chr14:17343016-17350571 (-)
DBA/2J	ENSMUSG00185043727	lncRNA gene	Chr14:21628218-21635762 (-)
FVB/NJ	ENSMUSG00205037643	lncRNA gene	Chr14:17169975-17177532 (-)
JF1/MsJ	ENSUMUG00000051872	lncRNA gene	Chr14:28856769-28864274 (-)
LP/J	ENSMUSG00230040086	lncRNA gene	Chr14:28909835-28917377 (-)
NOD/ShiLtJ	ENSMUSG00190038352	lncRNA gene	Chr14:17337630-17345154 (-)
NZO/HlLtJ	ENSMUSG00225038072	lncRNA gene	Chr14:23133268-23140810 (-)
PWK/PhJ	ENSLUMG00010021575	lncRNA gene	Chr14:5473152-5480694 (-)
SPRET/EiJ	ENSMSPG00010032750	lncRNA gene	Chr14:19005834-19013289 (-)
WSB/EiJ	ENSIUOG00005032774	lncRNA gene	Chr14:17182185-17189745 (-)

Homology

• Gene Tree
  Gm38408
  

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  36

• Ensembl
  ENSMUSG00000114924 (Evidence)
• NCBI Gene
  328362

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114924	Ensembl Gene Model | MGI Sequence Detail	102097	C57BL/6J
transcript	ENSMUST00000224815	Ensembl | MGI Sequence Detail	2630	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;