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Gm38393 Gene Detail
Summary
  • Symbol
    Gm38393
  • Name
    predicted gene, 38393
  • Feature Type
    protein coding gene
  • IDs
    MGI:5613898
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:59623897-59654812 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    238 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5613898
 protein coding gene Chr7:59623897-59654812 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032323
 protein coding gene Chr7:60773323-60803224 (-)
A/J MGP_AJ_G0032302
 protein coding gene Chr7:59686075-59717649 (-)
AKR/J MGP_AKRJ_G0032238
 protein coding gene Chr7:60994400-61025901 (-)
BALB/cJ MGP_BALBcJ_G0032314
 protein coding gene Chr7:59283285-59321665 (-)
C3H/HeJ MGP_C3HHeJ_G0032027
 protein coding gene Chr7:61313020-61348877 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032807
 protein coding gene Chr7:63420547-63451763 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029814
 protein coding gene Chr7:62120335-62150889 (-)
CAST/EiJ MGP_CASTEiJ_G0031356
 protein coding gene Chr7:52288251-52323664 (-)
CBA/J MGP_CBAJ_G0031992
 protein coding gene Chr7:65505431-65540443 (-)
DBA/2J MGP_DBA2J_G0032149
 protein coding gene Chr7:58615854-58647471 (-)
FVB/NJ MGP_FVBNJ_G0032103
 protein coding gene Chr7:58593263-58624020 (-)
LP/J MGP_LPJ_G0032230
 protein coding gene Chr7:61910316-61950768 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032140
 protein coding gene Chr7:65249882-65296160 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032824
 protein coding gene Chr7:60285248-60316941 (-)
PWK/PhJ MGP_PWKPhJ_G0031076
 protein coding gene Chr7:51590729-51625313 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030917
 protein coding gene Chr7:47751282-47783262 (-)
WSB/EiJ MGP_WSBEiJ_G0031474
 protein coding gene Chr7:60607592-60642226 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    25
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000000948 Ensembl Gene Model | MGI Sequence Detail 30916 C57BL/6J ±  kb
transcript ENSMUST00000179360 Ensembl | MGI Sequence Detail 1199 Not Applicable  
polypeptide ENSMUSP00000136053 Ensembl | MGI Sequence Detail 71 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 8
    Phenotypes 6
  • Earliest
    J:61682 Hagiwara N, et al., Sox6 is a candidate gene for p100H myopathy, heart block, and sudden neonatal death. Proc Natl Acad Sci U S A. 2000 Apr 11;97(8):4180-5
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory