Gm38356 Pseudogene Detail

Summary

• Symbol
  Gm38356
• Name
  predicted gene, 38356

• Feature Type
  pseudogene
• IDs
  MGI:5611584
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:66814692-66815099 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2 from dbSNP Build 142
• Strain Annotations
  49

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611584	pseudogene	Chr3:66814692-66815099 (-)
129S1/SvImJ	ENSMUSG00200001615	pseudogene	Chr3:63567830-63568237 (-)
A/J	ENSMUSG00195026929	pseudogene	Chr3:63683731-63684138 (-)
AKR/J	ENSMUSG00220025582	pseudogene	Chr3:63708894-63709301 (-)
BALB/cJ	ENSMUSG00180008517	pseudogene	Chr3:63735085-63735492 (-)
C3H/HeJ	ENSMUSG00175003857	pseudogene	Chr3:63586045-63586452 (-)
C57BL/6NJ	ENSMUSG00215007684	pseudogene	Chr3:64029438-64029845 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034643	pseudogene	Chr9:70599861-70600235 (-)
CAST/EiJ	ENSTCUG00005002558	pseudogene	Chr3:60420903-60421310 (-)
CAST/EiJ	ENSTCUG00005027157	pseudogene	Chr13:108392810-108393217 (+)
CAST/EiJ	ENSTCUG00005042730	pseudogene	Chr13:50892894-50893301 (-)
CAST/EiJ	ENSTCUG00005034177	pseudogene	Chr2:79948042-79948449 (-)
CAST/EiJ	ENSTCUG00005040282	pseudogene	ChrX:114929646-114930053 (-)
CAST/EiJ	ENSTCUG00005025891	pseudogene	Chr14:27455724-27456131 (-)
CAST/EiJ	ENSTCUG00005002554	pseudogene	Chr3:55678897-55679304 (-)
CAST/EiJ	ENSTCUG00005052495	pseudogene	Chr17:37552582-37552989 (-)
CAST/EiJ	ENSTCUG00005034093	pseudogene	Chr2:76711750-76712157 (-)
CAST/EiJ	ENSTCUG00005023285	pseudogene	Chr1:18066976-18067383 (+)
CAST/EiJ	ENSTCUG00005014391	pseudogene	Chr15:41744932-41745339 (+)
CBA/J	ENSMUSG00210002464	pseudogene	Chr3:63670154-63670561 (-)
DBA/2J	ENSMUSG00185015889	pseudogene	Chr3:63831820-63832227 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000014640	pseudogene	Chr15:14234840-14235247 (+)
JF1/MsJ	ENSUMUG00000050930	pseudogene	Chr8:96924512-96924919 (+)
JF1/MsJ	ENSUMUG00000055772	pseudogene	Chr7:8604391-8604798 (+)
JF1/MsJ	ENSUMUG00000017866	pseudogene	Chr8:107510589-107510996 (+)
JF1/MsJ	ENSUMUG00000031676	pseudogene	ChrX:37311338-37311745 (-)
JF1/MsJ	ENSUMUG00000022298	pseudogene	Chr14:82444306-82444713 (+)
JF1/MsJ	ENSUMUG00000016261	pseudogene	Chr16:71561088-71561495 (-)
JF1/MsJ	ENSUMUG00000058034	pseudogene	Chr17:37477809-37478216 (-)
JF1/MsJ	ENSUMUG00000022380	pseudogene	Chr8:119565985-119566392 (+)
JF1/MsJ	ENSUMUG00000058028	pseudogene	Chr17:35839258-35839665 (+)
JF1/MsJ	ENSUMUG00000012265	pseudogene	Chr12:16583379-16583786 (-)
JF1/MsJ	ENSUMUG00000041878	pseudogene	Chr13:58526720-58527127 (-)
LP/J	ENSMUSG00230002693	pseudogene	Chr3:65852338-65852745 (-)
NOD/ShiLtJ	ENSMUSG00190003190	pseudogene	Chr3:64135426-64135833 (-)
NZO/HlLtJ	ENSMUSG00225002721	pseudogene	Chr3:68574854-68575261 (-)
PWK/PhJ	ENSLUMG00010036912	pseudogene	Chr15:91325843-91326250 (+)
PWK/PhJ	ENSLUMG00010011520	pseudogene	Chr14:71297459-71297866 (+)
PWK/PhJ	ENSLUMG00010052539	pseudogene	Chr14:50375260-50375667 (+)
PWK/PhJ	ENSLUMG00010052505	pseudogene	Chr14:44452171-44452578 (-)
PWK/PhJ	ENSLUMG00010025590	pseudogene	Chr13:57189750-57190157 (-)
PWK/PhJ	ENSLUMG00010007037	pseudogene	Chr1:184702730-184703137 (-)
PWK/PhJ	ENSLUMG00010007049	pseudogene	Chr4:30990495-30990902 (+)
PWK/PhJ	ENSLUMG00010000071	pseudogene	Chr3:156116623-156117030 (-)
PWK/PhJ	ENSLUMG00010000073	pseudogene	Chr3:155669083-155669490 (-)
PWK/PhJ	ENSLUMG00010037023	pseudogene	Chr11:43274071-43274478 (+)
PWK/PhJ	ENSLUMG00010002067	pseudogene	Chr3:145382314-145382721 (+)
PWK/PhJ	ENSLUMG00010012314	pseudogene	Chr16:51585107-51585514 (+)
SPRET/EiJ	ENSMSPG00010023221	pseudogene	Chr12:111061164-111061571 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm38356
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm38356
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  51

• Ensembl
  ENSMUSG00000103318 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103318	Ensembl Gene Model | MGI Sequence Detail	408	C57BL/6J
transcript	ENSMUST00000194313	Ensembl | MGI Sequence Detail	408	Not Applicable

References

• Summaries
  All 5

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426