Gm38317 Pseudogene Detail

Summary

• Symbol
  Gm38317
• Name
  predicted gene, 38317

• Feature Type
  pseudogene
• IDs
  MGI:5611545
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:13040419-13040761 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  162 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611545	pseudogene	Chr3:13040419-13040761 (+)
129S1/SvImJ	ENSMUSG00200000826	pseudogene	Chr3:9777783-9778125 (+)
A/J	ENSMUSG00195016745	pseudogene	Chr3:10061247-10061589 (+)
AKR/J	ENSMUSG00220009525	pseudogene	Chr3:10105841-10106183 (+)
BALB/cJ	ENSMUSG00180001050	pseudogene	Chr3:10082182-10082524 (+)
C3H/HeJ	ENSMUSG00175003161	pseudogene	Chr3:10068402-10068744 (+)
C57BL/6NJ	ENSMUSG00215001297	pseudogene	Chr3:10080779-10081121 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210001815	pseudogene	Chr3:10053494-10053836 (+)
DBA/2J	ENSMUSG00185000574	pseudogene	Chr3:10047087-10047429 (+)
FVB/NJ	ENSMUSG00205005987	pseudogene	Chr3:9809547-9809889 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230004780	pseudogene	Chr3:11979035-11979377 (+)
NOD/ShiLtJ	ENSMUSG00190002219	pseudogene	Chr3:10163658-10164000 (+)
NZO/HlLtJ	ENSMUSG00225000754	pseudogene	Chr3:14530407-14530749 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005001663	pseudogene	Chr3:10127252-10127594 (+)

Homology

• Gene Tree
  Gm38317
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16

• Ensembl
  ENSMUSG00000103735 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103735	Ensembl Gene Model | MGI Sequence Detail	343	C57BL/6J
transcript	ENSMUST00000195564	Ensembl | MGI Sequence Detail	343	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;