Gm38293 Gene Detail

Summary

• Symbol
  Gm38293
• Name
  predicted gene, 38293

• Feature Type
  lncRNA gene
• IDs
  MGI:5611521
  NCBI Gene: 105244026
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:180590129-180596221 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  278 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611521	lncRNA gene	Chr1:180584308-180596225 (-)
129S1/SvImJ	ENSMUSG00200023944	lncRNA gene	Chr1:178343182-178348341 (-)
A/J	ENSMUSG00195042910	lncRNA gene	Chr1:177959824-177964906 (-)
AKR/J	ENSMUSG00220021889	lncRNA gene	Chr1:177196181-177201327 (-)
BALB/cJ	ENSMUSG00180039469	lncRNA gene	Chr1:177994396-177999555 (-)
C3H/HeJ	ENSMUSG00175039356	lncRNA gene	Chr1:178170210-178175369 (-)
C57BL/6NJ	ENSMUSG00215030994	lncRNA gene	Chr1:177395070-177400229 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004572	lincRNA gene	Chr1:170627518-170632373 (-)
CAST/EiJ	ENSTCUG00005043260	lncRNA gene	Chr1:175912618-175918223 (-)
CBA/J	ENSMUSG00210019162	lncRNA gene	Chr1:177831899-177837067 (-)
DBA/2J	ENSMUSG00185036332	lncRNA gene	Chr1:182451342-182456510 (-)
FVB/NJ	ENSMUSG00205040479	lncRNA gene	Chr1:176889861-176895053 (-)
JF1/MsJ	ENSUMUG00000022450	lncRNA gene	Chr1:181429869-181434978 (-)
LP/J	ENSMUSG00230033125	lncRNA gene	Chr1:182009023-182014182 (-)
NOD/ShiLtJ	ENSMUSG00190039027	lncRNA gene	Chr1:177856061-177861220 (-)
NZO/HlLtJ	ENSMUSG00225011197	lncRNA gene	Chr1:185763377-185768523 (-)
PWK/PhJ	ENSLUMG00010017102	lncRNA gene	Chr1:176704026-176709107 (-)
SPRET/EiJ	ENSMSPG00010035846	lncRNA gene	Chr1:180159953-180164813 (-)
WSB/EiJ	ENSIUOG00005011571	lncRNA gene	Chr1:177068732-177073806 (-)

Homology

• Gene Tree
  Gm38293
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm38293
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000103156 (Evidence)
• NCBI Gene
  105244026

Representative Sequences			Length	Strain/Species
genomic	105244026	NCBI Gene Model | MGI Sequence Detail	6093	C57BL/6J
transcript	XR_865779	RefSeq | MGI Sequence Detail	1533	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;