Gm38287 Gene Detail

Summary

• Symbol
  Gm38287
• Name
  predicted gene, 38287

• Feature Type
  lncRNA gene
• IDs
  MGI:5611515
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:25070793-25073351 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  11 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611515	lncRNA gene	Chr2:25070793-25073351 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003519	antisense lncRNA gene	Chr2:23039794-23042352 (-)
A/J	MGP_AJ_G0003499	antisense lncRNA gene	Chr2:22145656-22148214 (-)
AKR/J	MGP_AKRJ_G0003478	antisense lncRNA gene	Chr2:22899663-22902221 (-)
BALB/cJ	MGP_BALBcJ_G0003488	antisense lncRNA gene	Chr2:22267972-22270530 (-)
C3H/HeJ	MGP_C3HHeJ_G0003436	antisense lncRNA gene	Chr2:22829336-22831894 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003626	antisense lncRNA gene	Chr2:23776345-23778903 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003136	antisense lncRNA gene	Chr2:21076824-21079380 (-)
CAST/EiJ	MGP_CASTEiJ_G0003399	antisense lncRNA gene	Chr2:22713148-22715706 (-)
CBA/J	MGP_CBAJ_G0003433	antisense lncRNA gene	Chr2:24613886-24616444 (-)
DBA/2J	MGP_DBA2J_G0003441	antisense lncRNA gene	Chr2:22001935-22004493 (-)
FVB/NJ	MGP_FVBNJ_G0003460	antisense lncRNA gene	Chr2:21740713-21743271 (-)
LP/J	MGP_LPJ_G0003514	antisense lncRNA gene	Chr2:22991056-22993614 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003448	antisense lncRNA gene	Chr2:24818434-24820992 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003629	antisense lncRNA gene	Chr2:22846402-22848960 (-)
PWK/PhJ	MGP_PWKPhJ_G0003355	antisense lncRNA gene	Chr2:21812904-21815461 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003300	antisense lncRNA gene	Chr2:22994600-22997156 (-)
WSB/EiJ	MGP_WSBEiJ_G0003434	antisense lncRNA gene	Chr2:22916673-22919231 (-)

Homology

• Gene Tree
  Gm38287
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000103217 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103217	Ensembl Gene Model | MGI Sequence Detail	2559	C57BL/6J
transcript	ENSMUST00000195193	Ensembl | MGI Sequence Detail	2051	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;