Gm38261 Pseudogene Detail

Summary

• Symbol
  Gm38261
• Name
  predicted gene, 38261

• Feature Type
  pseudogene
• IDs
  MGI:5611489
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:49558010-49558325 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611489	pseudogene	Chr3:49558010-49558325 (+)
129S1/SvImJ	ENSMUSG00200000380	pseudogene	Chr3:46383122-46383437 (+)
A/J	ENSMUSG00195000778	pseudogene	Chr3:46350609-46350924 (+)
AKR/J	ENSMUSG00220016141	pseudogene	Chr3:46399698-46400013 (+)
BALB/cJ	ENSMUSG00180000436	pseudogene	Chr3:46428032-46428347 (+)
C3H/HeJ	ENSMUSG00175002099	pseudogene	Chr3:46268635-46268950 (+)
C57BL/6NJ	ENSMUSG00215000643	pseudogene	Chr3:46686688-46687003 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012860	pseudogene	ChrX:108010412-108010701 (+)
CAST/EiJ	ENSTCUG00005009846	pseudogene	Chr3:46092865-46093180 (+)
CBA/J	ENSMUSG00210000841	pseudogene	Chr3:46381666-46381981 (+)
DBA/2J	ENSMUSG00185000403	pseudogene	Chr3:46609886-46610201 (+)
FVB/NJ	ENSMUSG00205009810	pseudogene	Chr3:45594710-45595025 (+)
JF1/MsJ	ENSUMUG00000024569	pseudogene	Chr3:46028882-46029197 (+)
LP/J	ENSMUSG00230000357	pseudogene	Chr3:48555414-48555729 (+)
NOD/ShiLtJ	ENSMUSG00190000478	pseudogene	Chr3:46739692-46740007 (+)
NZO/HlLtJ	ENSMUSG00225018099	pseudogene	Chr3:51180350-51180665 (+)
PWK/PhJ	ENSLUMG00010009859	pseudogene	Chr3:46175449-46175764 (+)
SPRET/EiJ	ENSMSPG00010007403	pseudogene	Chr3:46814794-46815109 (+)
WSB/EiJ	ENSIUOG00005000467	pseudogene	Chr3:46554613-46554928 (+)

Homology

• Gene Tree
  Gm38261
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  2
• Genomic Mutations
  2 involving Gm38261
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000102731 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102731	Ensembl Gene Model | MGI Sequence Detail	316	C57BL/6J
transcript	ENSMUST00000192608	Ensembl | MGI Sequence Detail	316	Not Applicable

References

• Summaries
  All 9

  Diseases 1

  Phenotypes 7
• Earliest
  J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426