Gm38247 Pseudogene Detail

Summary

• Symbol
  Gm38247
• Name
  predicted gene, 38247

• Feature Type
  pseudogene
• IDs
  MGI:5611475
  NCBI Gene: 108168852
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:51543917-51544349 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  163 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611475	pseudogene	Chr3:51543915-51544468 (-)
129S1/SvImJ	ENSMUSG00200000561	pseudogene	Chr3:48372026-48372458 (-)
A/J	ENSMUSG00195000799	pseudogene	Chr3:48330352-48330784 (-)
AKR/J	ENSMUSG00220016043	pseudogene	Chr3:48384909-48385341 (-)
BALB/cJ	ENSMUSG00180000654	pseudogene	Chr3:48407679-48408111 (-)
C3H/HeJ	ENSMUSG00175002150	pseudogene	Chr3:48242725-48243157 (-)
C57BL/6NJ	ENSMUSG00215000608	pseudogene	Chr3:48677209-48677641 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010849	pseudogene	Chr3:45276782-45277180 (-)
CAST/EiJ	ENSTCUG00005010073	pseudogene	Chr3:48053524-48053946 (-)
CBA/J	ENSMUSG00210000962	pseudogene	Chr3:48355577-48356009 (-)
DBA/2J	ENSMUSG00185000433	pseudogene	Chr3:48592738-48593170 (-)
FVB/NJ	ENSMUSG00205010125	pseudogene	Chr3:47574996-47575428 (-)
JF1/MsJ	ENSUMUG00000028662	pseudogene	Chr3:48011382-48011804 (-)
LP/J	ENSMUSG00230000520	pseudogene	Chr3:50544219-50544651 (-)
NOD/ShiLtJ	ENSMUSG00190000623	pseudogene	Chr3:48722626-48723058 (-)
NZO/HlLtJ	ENSMUSG00225018472	pseudogene	Chr3:53167229-53167661 (-)
PWK/PhJ	ENSLUMG00010010352	pseudogene	Chr3:48180933-48181355 (-)
SPRET/EiJ	ENSMSPG00010007653	pseudogene	Chr3:48840957-48841389 (-)
WSB/EiJ	ENSIUOG00005000585	pseudogene	Chr3:48516707-48517140 (-)

Homology

• Gene Tree
  Gm38247
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  2
• Genomic Mutations
  2 involving Gm38247
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000104166 (Evidence)
• NCBI Gene
  108168852

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104166	Ensembl Gene Model | MGI Sequence Detail	433	C57BL/6J
transcript	ENSMUST00000194675	Ensembl | MGI Sequence Detail	433	Not Applicable

References

• Summaries
  All 11

  Diseases 1

  Phenotypes 7
• Earliest
  J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426