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Gm38225 Gene Detail
Summary
  • Symbol
    Gm38225
  • Name
    predicted gene, 38225
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5611453
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr18:37085704-37086096 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    59 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5611453
 lncRNA gene Chr18:37085704-37086096 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003438
 antisense lncRNA gene Chr18:35360935-35366326 (-)
A/J MGP_AJ_G0003417
 antisense lncRNA gene Chr18:34128742-34129134 (-)
AKR/J MGP_AKRJ_G0003397
 antisense lncRNA gene Chr18:35099640-35100032 (-)
BALB/cJ MGP_BALBcJ_G0003406
 antisense lncRNA gene Chr18:34176744-34177136 (-)
C3H/HeJ MGP_C3HHeJ_G0003355
 antisense lncRNA gene Chr18:35147136-35147528 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003545
 antisense lncRNA gene Chr18:36611095-36611510 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003059
 antisense lncRNA gene Chr18:34223853-34224245 (-)
CAST/EiJ MGP_CASTEiJ_G0003318
 antisense lncRNA gene Chr18:35146905-35148056 (-)
CBA/J MGP_CBAJ_G0003352
 antisense lncRNA gene Chr18:37691408-37693145 (-)
DBA/2J MGP_DBA2J_G0003361
 antisense lncRNA gene Chr18:33743424-33743816 (-)
FVB/NJ MGP_FVBNJ_G0003378
 antisense lncRNA gene Chr18:33457553-33457945 (-)
LP/J MGP_LPJ_G0003432
 antisense lncRNA gene Chr18:35415038-35415430 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003366
 antisense lncRNA gene Chr18:38941144-38943052 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003547
 antisense lncRNA gene Chr18:34952978-34953370 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0003220
 antisense lncRNA gene Chr18:35231715-35232107 (-)
WSB/EiJ MGP_WSBEiJ_G0003353
 antisense lncRNA gene Chr18:34861728-34863794 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000102634 Ensembl Gene Model | MGI Sequence Detail 393 C57BL/6J ±  kb
transcript ENSMUST00000194001 Ensembl | MGI Sequence Detail 393 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 3
    Phenotypes 2
  • Earliest
    J:244163 Hasegawa S, et al., Distinct and Cooperative Functions for the Protocadherin-alpha, -beta and -gamma Clusters in Neuronal Survival and Axon Targeting. Front Mol Neurosci. 2016;9:155
  • Latest
    J:313451 Xu L, et al., Abnormal neocortex arealization and Sotos-like syndrome-associated behavior in Setd2 mutant mice. Sci Adv. 2021 Jan;7(1)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory