Gm38201 Gene Detail

Summary

• Symbol
  Gm38201
• Name
  predicted gene, 38201

• Feature Type
  lncRNA gene
• IDs
  MGI:5611429
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:92750604-92750990 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  88 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611429	lncRNA gene	Chr3:92750604-92750990 (-)
129S1/SvImJ	ENSMUSG00200040067	lncRNA gene	Chr3:89538315-89538701 (-)
A/J	ENSMUSG00195053911	lncRNA gene	Chr3:89547620-89548006 (-)
AKR/J	ENSMUSG00220051386	lncRNA gene	Chr3:88768764-88769150 (-)
BALB/cJ	ENSMUSG00180049496	lncRNA gene	Chr3:89718583-89718969 (-)
C3H/HeJ	ENSMUSG00175049435	lncRNA gene	Chr3:89485438-89485824 (-)
C57BL/6NJ	ENSMUSG00215050734	lncRNA gene	Chr3:90097107-90097493 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005675	lincRNA gene	Chr3:86995452-86995829 (-)
CAST/EiJ	ENSTCUG00005048102	lncRNA gene	Chr3:89871633-89872020 (-)
CBA/J	ENSMUSG00210048511	lncRNA gene	Chr3:89600558-89600944 (-)
DBA/2J	ENSMUSG00185053339	lncRNA gene	Chr3:89802853-89803239 (-)
FVB/NJ	ENSMUSG00205051382	lncRNA gene	Chr3:88594776-88595162 (-)
JF1/MsJ	ENSUMUG00000051826	lncRNA gene	Chr3:89364245-89364632 (-)
LP/J	ENSMUSG00230046342	lncRNA gene	Chr3:91835779-91836165 (-)
NOD/ShiLtJ	ENSMUSG00190051551	lncRNA gene	Chr3:89921264-89921650 (-)
NZO/HlLtJ	ENSMUSG00225012701	lncRNA gene	Chr3:94683428-94683814 (-)
PWK/PhJ	ENSLUMG00010052132	lncRNA gene	Chr3:89422445-89422832 (-)
SPRET/EiJ	ENSMSPG00010050515	lncRNA gene	Chr3:89880587-89880970 (-)
WSB/EiJ	ENSIUOG00005050895	lncRNA gene	Chr3:90073066-90073452 (-)

Homology

• Gene Tree
  Gm38201
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm38201
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000102469 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102469	Ensembl Gene Model | MGI Sequence Detail	387	C57BL/6J
transcript	ENSMUST00000192143	Ensembl | MGI Sequence Detail	387	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;