Gm38143 Gene Detail

Summary

• Symbol
  Gm38143
• Name
  predicted gene, 38143

• Feature Type
  lncRNA gene
• IDs
  MGI:5611371
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:73598171-73607790 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611371	lncRNA gene	Chr7:73598171-73607790 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015676	unclassified non-coding RNA gene	Chr7:75537128-75546678 (+)
A/J	MGP_AJ_G0015655	unclassified non-coding RNA gene	Chr7:73827914-73837446 (+)
AKR/J	MGP_AKRJ_G0015618	unclassified non-coding RNA gene	Chr7:75386503-75396041 (+)
BALB/cJ	MGP_BALBcJ_G0015616	unclassified non-coding RNA gene	Chr7:73579662-73589185 (+)
C3H/HeJ	MGP_C3HHeJ_G0015438	unclassified non-coding RNA gene	Chr7:76146170-76155708 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0016070	unclassified non-coding RNA gene	Chr7:78645846-78655476 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013800	unclassified non-coding RNA gene	Chr7:76468345-76469587 (+)
CAST/EiJ	MGP_CASTEiJ_G0014993	unclassified non-coding RNA gene	Chr7:66991398-67000902 (+)
CBA/J	MGP_CBAJ_G0015419	unclassified non-coding RNA gene	Chr7:81209350-81218890 (+)
DBA/2J	MGP_DBA2J_G0015514	unclassified non-coding RNA gene	Chr7:72493707-72503239 (+)
FVB/NJ	MGP_FVBNJ_G0015521	unclassified non-coding RNA gene	Chr7:72544793-72554328 (+)
LP/J	MGP_LPJ_G0015594	unclassified non-coding RNA gene	Chr7:76765944-76775496 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015543	unclassified non-coding RNA gene	Chr7:81356471-81366005 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016112	unclassified non-coding RNA gene	Chr7:74854351-74863907 (+)
PWK/PhJ	MGP_PWKPhJ_G0014775	unclassified non-coding RNA gene	Chr7:65666955-65676752 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014564	unclassified non-coding RNA gene	Chr7:61946066-61955531 (+)
WSB/EiJ	MGP_WSBEiJ_G0015098	unclassified non-coding RNA gene	Chr7:75211636-75221174 (+)

Homology

• Gene Tree
  Gm38143
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm38143
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000102384 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102384	Ensembl Gene Model | MGI Sequence Detail	9620	C57BL/6J
transcript	ENSMUST00000191751	Ensembl | MGI Sequence Detail	644	Not Applicable

References

• Summaries
  All 6

  Phenotypes 5
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:29904 Johnson DK, et al., Molecular analysis of 36 mutations at the mouse pink-eyed dilution (p) locus. Genetics. 1995 Dec;141(4):1563-71