Gm38137 Gene Detail

Summary

• Symbol
  Gm38137
• Name
  predicted gene, 38137

• Feature Type
  lncRNA gene
• IDs
  MGI:5611365
  NCBI Gene: 105243938
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:60919497-60920897 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611365	lncRNA gene	Chr1:60900117-60922220 (+)
129S1/SvImJ	ENSMUSG00200019148	unclassified gene	Chr1:58419386-58420786 (+)
A/J	ENSMUSG00195030889	unclassified gene	Chr1:57958715-57960115 (+)
AKR/J	ENSMUSG00220042236	unclassified gene	Chr1:58057264-58058662 (+)
BALB/cJ	ENSMUSG00180014272	unclassified gene	Chr1:58195995-58197393 (+)
C3H/HeJ	ENSMUSG00175001284	unclassified gene	Chr1:58336041-58337441 (+)
C57BL/6NJ	ENSMUSG00215036185	unclassified gene	Chr1:58267951-58269351 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000292	unclassified gene	Chr1:55003881-55005273 (+)
CAST/EiJ	ENSTCUG00005014564	unclassified gene	Chr1:58100698-58102099 (+)
CBA/J	ENSMUSG00210054209	unclassified gene	Chr1:58021731-58023131 (+)
DBA/2J	ENSMUSG00185055747	unclassified gene	Chr1:59140784-59142184 (+)
FVB/NJ	ENSMUSG00205027235	unclassified gene	Chr1:57973581-57974981 (+)
JF1/MsJ	ENSUMUG00000047916	unclassified gene	Chr1:58101055-58102454 (+)
LP/J	ENSMUSG00230029758	unclassified gene	Chr1:59141250-59142650 (+)
NOD/ShiLtJ	ENSMUSG00190040619	unclassified gene	Chr1:58188471-58189869 (+)
NZO/HlLtJ	ENSMUSG00225001356	unclassified gene	Chr1:62365337-62366736 (+)
PWK/PhJ	ENSLUMG00010026384	unclassified gene	Chr1:57621712-57623107 (+)
SPRET/EiJ	ENSMSPG00010026510	unclassified gene	Chr1:59565327-59566723 (+)
WSB/EiJ	ENSIUOG00005022107	unclassified gene	Chr1:57803459-57804858 (+)

Homology

• Gene Tree
  Gm38137
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm38137
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  4

• Ensembl
  ENSMUSG00000102549 (Evidence)
• NCBI Gene
  105243938

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102549	Ensembl Gene Model | MGI Sequence Detail	1401	C57BL/6J
transcript	AK042054	GenBank | ENA | DDBJ | MGI Sequence Detail	1400	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45