Gm38086 Pseudogene Detail

Summary

• Symbol
  Gm38086
• Name
  predicted gene, 38086

• Feature Type
  pseudogene
• IDs
  MGI:5611314
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:93631925-93632358 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  5 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611314	pseudogene	Chr3:93631925-93632358 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195053870	pseudogene	Chr3:90738523-90738956 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180049550	pseudogene	Chr3:90604236-90604669 (-)
C3H/HeJ	ENSMUSG00175050565	pseudogene	Chr3:90373299-90373730 (-)
C3H/HeJ	ENSMUSG00175049977	pseudogene	Chr3:90594666-90595099 (-)
C57BL/6NJ	ENSMUSG00215039998	pseudogene	Chr3:90975909-90976342 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037297	pseudogene	Chr3:71817834-71818397 (-)
CAST/EiJ	ENSTCUG00005049374	pseudogene	Chr3:91255764-91256196 (-)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000053267	pseudogene	Chr3:90540941-90541374 (-)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225012809	pseudogene	Chr3:95565947-95566380 (-)
PWK/PhJ	ENSLUMG00010053139	pseudogene	Chr3:90312035-90312468 (-)
PWK/PhJ	ENSLUMG00010053040	pseudogene	Chr3:90538686-90539119 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm38086
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm38086
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14

• Ensembl
  ENSMUSG00000102511 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102511	Ensembl Gene Model | MGI Sequence Detail	434	C57BL/6J
transcript	ENSMUST00000193543	Ensembl | MGI Sequence Detail	434	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426