Gm38070 Gene Detail

Summary

• Symbol
  Gm38070
• Name
  predicted gene, 38070

• Feature Type
  unclassified gene
• IDs
  MGI:5611298
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr1:40277180-40283659 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  228 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611298	unclassified gene	Chr1:40277180-40283659 (+)
129S1/SvImJ	ENSMUSG00200004506	unclassified gene	Chr1:37883099-37889635 (+)
A/J	ENSMUSG00195044218	unclassified gene	Chr1:37552272-37558749 (+)
AKR/J	ENSMUSG00220009953	unclassified gene	Chr1:37537270-37543748 (+)
BALB/cJ	ENSMUSG00180011842	unclassified gene	Chr1:37616741-37623217 (+)
C3H/HeJ	ENSMUSG00175001437	unclassified gene	Chr1:37555268-37561741 (+)
C57BL/6NJ	ENSMUSG00215033744	unclassified gene	Chr1:37591856-37598337 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003268	unclassified gene	Chr1:37651754-37657948 (+)
CBA/J	ENSMUSG00210006528	unclassified gene	Chr1:37353481-37359958 (+)
DBA/2J	ENSMUSG00185011676	unclassified gene	Chr1:38455731-38462214 (+)
FVB/NJ	ENSMUSG00205039633	unclassified gene	Chr1:37559919-37566396 (+)
JF1/MsJ	ENSUMUG00000029178	unclassified gene	Chr1:37659770-37665970 (+)
LP/J	ENSMUSG00230026672	unclassified gene	Chr1:38483750-38490285 (+)
NOD/ShiLtJ	ENSMUSG00190038247	unclassified gene	Chr1:37569259-37575732 (+)
NZO/HlLtJ	ENSMUSG00225000576	unclassified gene	Chr1:41744973-41751508 (+)
PWK/PhJ	ENSLUMG00010036265	unclassified gene	Chr1:37184667-37190858 (+)
SPRET/EiJ	ENSMSPG00010029406	unclassified gene	Chr1:38664845-38669654 (+)
WSB/EiJ	ENSIUOG00005039849	unclassified gene	Chr1:37491995-37498531 (+)

Homology

• Gene Tree
  Gm38070
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000103560 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103560	Ensembl Gene Model | MGI Sequence Detail	6480	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm38070:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr6421	Chr1:40276375-40276385 (+)	-800 bp
Tssr6422	Chr1:40280130-40280131 (+)	2,951 bp