Gm38044 Pseudogene Detail

Summary

• Symbol
  Gm38044
• Name
  predicted gene, 38044

• Feature Type
  pseudogene
• IDs
  MGI:5611272
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:42539548-42540034 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  155 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611272	pseudogene	Chr3:42539548-42540034 (-)
129S1/SvImJ	ENSMUSG00200006502	pseudogene	Chr3:39296196-39296682 (-)
A/J	ENSMUSG00195001437	pseudogene	Chr3:39279522-39280008 (-)
AKR/J	ENSMUSG00220000604	pseudogene	Chr3:39358230-39358716 (-)
BALB/cJ	ENSMUSG00180002813	pseudogene	Chr3:39408176-39408662 (-)
C3H/HeJ	ENSMUSG00175003390	pseudogene	Chr3:39273233-39273719 (-)
C57BL/6NJ	ENSMUSG00215001536	pseudogene	Chr3:39676676-39677162 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010825	pseudogene	Chr3:37035407-37035875 (-)
CAST/EiJ	ENSTCUG00005001047	pseudogene	Chr3:39126065-39126555 (-)
CBA/J	ENSMUSG00210001720	pseudogene	Chr3:39372790-39373276 (-)
DBA/2J	ENSMUSG00185001537	pseudogene	Chr3:39570946-39571432 (-)
FVB/NJ	ENSMUSG00205000743	pseudogene	Chr3:38666288-38666774 (-)
JF1/MsJ	ENSUMUG00000000819	pseudogene	Chr3:39065216-39065732 (-)
LP/J	ENSMUSG00230000313	pseudogene	Chr3:41537551-41538037 (-)
NOD/ShiLtJ	ENSMUSG00190001582	pseudogene	Chr3:39653507-39653993 (-)
NZO/HlLtJ	ENSMUSG00225000844	pseudogene	Chr3:44158522-44159008 (-)
PWK/PhJ	ENSLUMG00010000759	pseudogene	Chr3:39130036-39130547 (-)
SPRET/EiJ	ENSMSPG00010000739	pseudogene	Chr3:39607301-39607788 (-)
WSB/EiJ	ENSIUOG00005013686	pseudogene	Chr3:39531987-39532473 (-)

Homology

• Gene Tree
  Gm38044
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  2
• Genomic Mutations
  2 involving Gm38044
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000104294 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104294	Ensembl Gene Model | MGI Sequence Detail	487	C57BL/6J
transcript	ENSMUST00000192964	Ensembl | MGI Sequence Detail	487	Not Applicable

References

• Summaries
  All 9

  Diseases 1

  Phenotypes 7
• Earliest
  J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426