Ighv(III)-5 Pseudogene Detail

Summary

• Symbol
  Ighv(III)-5
• Name
  immunoglobulin heavy variable (III)-5, pseudogene
• Synonyms
  Gm37961

• Feature Type
  pseudogenic gene segment
• IDs
  MGI:5611189
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:113932174-113932472 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611189	pseudogenic gene segment	Chr12:113932174-113932472 (-)
129S1/SvImJ	ENSMUSG00200031057	pseudogenic gene segment	Chr12:105694301-105694598 (-)
A/J	ENSMUSG00195048614	pseudogenic gene segment	Chr12:108402483-108402780 (-)
AKR/J	ENSMUSG00220037931	pseudogenic gene segment	Chr12:106175283-106175581 (-)
BALB/cJ	ENSMUSG00180053054	pseudogenic gene segment	Chr12:107860209-107860506 (-)
C3H/HeJ	ENSMUSG00175046762	pseudogenic gene segment	Chr12:110165078-110165376 (-)
C57BL/6NJ	ENSMUSG00215051579	pseudogenic gene segment	Chr12:106791123-106791421 (-)
C57BL/6NJ	ENSMUSG00215048396	pseudogenic gene segment	Chr12:106721688-106721986 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044935	pseudogenic gene segment	Chr12:106509350-106509639 (-)
CAST/EiJ	ENSTCUG00005044187	pseudogenic gene segment	Chr12:106367859-106368157 (-)
CBA/J	ENSMUSG00210042377	pseudogenic gene segment	Chr12:107241589-107241887 (-)
DBA/2J	no annotation
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000025797	pseudogenic gene segment	Chr12:113725558-113725668 (-)
LP/J	ENSMUSG00230049556	pseudogenic gene segment	Chr12:116054064-116054362 (-)
LP/J	ENSMUSG00230046843	pseudogenic gene segment	Chr12:115984633-115984931 (-)
NOD/ShiLtJ	ENSMUSG00190039080	pseudogenic gene segment	Chr12:105567762-105568060 (-)
NOD/ShiLtJ	ENSMUSG00190042640	pseudogenic gene segment	Chr12:105637182-105637480 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010050992	pseudogenic gene segment	Chr12:107393355-107393465 (-)
SPRET/EiJ	ENSMSPG00010026498	pseudogenic gene segment	Chr12:110259667-110259965 (-)
SPRET/EiJ	ENSMSPG00010023941	pseudogenic gene segment	Chr12:109354058-109354356 (-)
SPRET/EiJ	ENSMSPG00010026430	pseudogenic gene segment	Chr12:110116408-110116704 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Ighv(III)-5
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000104393 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104393	Ensembl Gene Model | MGI Sequence Detail	299	C57BL/6J
transcript	ENSMUST00000192729	Ensembl | MGI Sequence Detail	299	Not Applicable

Other
Accession IDs

MGI:8249077

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;