Gm37854 Gene Detail

Summary

• Symbol
  Gm37854
• Name
  predicted gene, 37854

• Feature Type
  lncRNA gene
• IDs
  MGI:5611082
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:49956421-49965232 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  426 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611082	lncRNA gene	Chr3:49956421-49965232 (+)
129S1/SvImJ	ENSMUSG00200000699	lncRNA gene	Chr3:46781483-46790294 (+)
A/J	ENSMUSG00195000855	lncRNA gene	Chr3:46739951-46748313 (+)
AKR/J	ENSMUSG00220016180	lncRNA gene	Chr3:46801161-46809516 (+)
BALB/cJ	ENSMUSG00180000664	lncRNA gene	Chr3:46817362-46825720 (+)
C3H/HeJ	ENSMUSG00175002139	lncRNA gene	Chr3:46658967-46667777 (+)
C57BL/6NJ	ENSMUSG00215000599	lncRNA gene	Chr3:47085129-47093943 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010124	lncRNA gene	Chr3:46478687-46487506 (+)
CBA/J	ENSMUSG00210001042	lncRNA gene	Chr3:46772010-46780821 (+)
DBA/2J	ENSMUSG00185000451	lncRNA gene	Chr3:47009097-47017453 (+)
FVB/NJ	ENSMUSG00205010002	lncRNA gene	Chr3:45983988-45992347 (+)
JF1/MsJ	ENSUMUG00000026972	lncRNA gene	Chr3:46427508-46436320 (+)
LP/J	ENSMUSG00230000430	lncRNA gene	Chr3:48953759-48962570 (+)
NOD/ShiLtJ	ENSMUSG00190000808	lncRNA gene	Chr3:47138897-47147253 (+)
NZO/HlLtJ	ENSMUSG00225018289	lncRNA gene	Chr3:51578714-51587525 (+)
PWK/PhJ	ENSLUMG00010010602	lncRNA gene	Chr3:46585136-46593976 (+)
SPRET/EiJ	ENSMSPG00010007452	lncRNA gene	Chr3:47220311-47228804 (+)
WSB/EiJ	ENSIUOG00005000547	lncRNA gene	Chr3:46934857-46943702 (+)

Homology

• Gene Tree
  Gm37854
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm37854
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000102892 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102892	Ensembl Gene Model | MGI Sequence Detail	8812	C57BL/6J
transcript	ENSMUST00000192149	Ensembl | MGI Sequence Detail	1463	Not Applicable

References

• Summaries
  All 7

  Phenotypes 5
• Earliest
  J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
• Latest
  J:157707 Puligilla C, et al., Sox2 induces neuronal formation in the developing mammalian cochlea. J Neurosci. 2010 Jan 13;30(2):714-22