Gm37787 Gene Detail

Summary

• Symbol
  Gm37787
• Name
  predicted gene, 37787

• Feature Type
  lncRNA gene
• IDs
  MGI:5611015
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr1:171462447-171463590 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  45 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5611015	lncRNA gene	Chr1:171462447-171463590 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002792	antisense lncRNA gene	Chr1:177465464-177466614 (+)
A/J	MGP_AJ_G0002769	antisense lncRNA gene	Chr1:170203281-170204431 (+)
AKR/J	MGP_AKRJ_G0002750	antisense lncRNA gene	Chr1:175341185-175342336 (+)
BALB/cJ	MGP_BALBcJ_G0002756	antisense lncRNA gene	Chr1:170745307-170746457 (+)
C3H/HeJ	MGP_C3HHeJ_G0002714	antisense lncRNA gene	Chr1:175912746-175913896 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002898	antisense lncRNA gene	Chr1:183347303-183348446 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002445	antisense lncRNA gene	Chr1:161927167-161928378 (+)
CAST/EiJ	MGP_CASTEiJ_G0002686	antisense lncRNA gene	Chr1:175277895-175279045 (+)
CBA/J	MGP_CBAJ_G0002709	antisense lncRNA gene	Chr1:189880081-189881231 (+)
DBA/2J	MGP_DBA2J_G0002716	antisense lncRNA gene	Chr1:169148221-169149371 (+)
FVB/NJ	MGP_FVBNJ_G0002736	antisense lncRNA gene	Chr1:167400644-167401795 (+)
LP/J	MGP_LPJ_G0002792	antisense lncRNA gene	Chr1:178540094-178541244 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002726	antisense lncRNA gene	Chr1:197167874-197169024 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002903	antisense lncRNA gene	Chr1:175206086-175207236 (+)
PWK/PhJ	MGP_PWKPhJ_G0002644	antisense lncRNA gene	Chr1:168512023-168513173 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002594	antisense lncRNA gene	Chr1:174130374-174131523 (+)
WSB/EiJ	MGP_WSBEiJ_G0002715	antisense lncRNA gene	Chr1:175375296-175376446 (+)

Homology

• Gene Tree
  Gm37787
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Targeted
  1
• Genomic Mutations
  3 involving Gm37787
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000103219 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103219	Ensembl Gene Model | MGI Sequence Detail	1144	C57BL/6J
transcript	ENSMUST00000192524	Ensembl | MGI Sequence Detail	585	Not Applicable

References

• Summaries
  All 6

  Phenotypes 5
• Earliest
  J:237231 Guo H, et al., Deletion of Slam locus in mice reveals inhibitory role of SLAM family in NK cell responses regulated by cytokines and LFA-1. J Exp Med. 2016 Sep 19;213(10):2187-207
• Latest
  J:328788 Tang Z, et al., Inflammatory macrophages exploit unconventional pro-phagocytic integrins for phagocytosis and anti-tumor immunity. Cell Rep. 2021 Dec 14;37(11):110111

TSS for Gm37787:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr10075	Chr1:171462325-171462337 (+)	-116 bp
Tssr10076	Chr1:171462439-171462474 (+)	10 bp