Gm37552 Gene Detail

Summary

• Symbol
  Gm37552
• Name
  predicted gene, 37552

• Feature Type
  lncRNA gene
• IDs
  MGI:5610780
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr1:136180409-136183584 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  188 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610780	lncRNA gene	Chr1:136180409-136183584 (-)
129S1/SvImJ	ENSMUSG00200008923	lncRNA gene	Chr1:133804785-133807964 (-)
A/J	ENSMUSG00195017605	lncRNA gene	Chr1:132867976-132871154 (-)
AKR/J	ENSMUSG00220003517	lncRNA gene	Chr1:132758831-132762011 (-)
BALB/cJ	ENSMUSG00180011521	lncRNA gene	Chr1:133408523-133411697 (-)
C3H/HeJ	ENSMUSG00175006976	lncRNA gene	Chr1:133112009-133115185 (-)
C57BL/6NJ	ENSMUSG00215019871	lncRNA gene	Chr1:133110372-133113545 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004505	lincRNA gene	Chr1:127869425-127872544 (-)
CAST/EiJ	ENSTCUG00005039070	lncRNA gene	Chr1:132044406-132047555 (-)
CBA/J	ENSMUSG00210014397	lncRNA gene	Chr1:133042324-133045499 (-)
DBA/2J	ENSMUSG00185033970	lncRNA gene	Chr1:137419571-137422762 (-)
FVB/NJ	ENSMUSG00205002513	lncRNA gene	Chr1:132378054-132381233 (-)
JF1/MsJ	ENSUMUG00000051789	lncRNA gene	Chr1:136546890-136550053 (-)
LP/J	ENSMUSG00230039631	lncRNA gene	Chr1:136943124-136946300 (-)
NOD/ShiLtJ	ENSMUSG00190003130	lncRNA gene	Chr1:133056340-133059515 (-)
NZO/HlLtJ	ENSMUSG00225020238	lncRNA gene	Chr1:140710106-140713283 (-)
PWK/PhJ	ENSLUMG00010002170	lncRNA gene	Chr1:132170652-132173805 (-)
SPRET/EiJ	ENSMSPG00010012786	lncRNA gene	Chr1:134971363-134974553 (-)
WSB/EiJ	ENSIUOG00005030105	lncRNA gene	Chr1:132826031-132829212 (-)

Homology

• Gene Tree
  Gm37552
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm37552
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000102941 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102941	Ensembl Gene Model | MGI Sequence Detail	3176	C57BL/6J
transcript	ENSMUST00000193939	Ensembl | MGI Sequence Detail	2520	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm37552:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr13932	Chr1:136183596-136183614 (-)	-21 bp
Tssr13931	Chr1:136183488-136183509 (-)	85 bp