Gm37529 Gene Detail

Summary

• Symbol
  Gm37529
• Name
  predicted gene, 37529

• Feature Type
  lncRNA gene
• IDs
  MGI:5610757
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:160149256-160154648 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610757	lncRNA gene	Chr1:160149256-160154648 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0036879	sense intronic lncRNA gene	Chr1:165519695-165526159 (-)
A/J	MGP_AJ_G0036867	sense intronic lncRNA gene	Chr1:158803943-158809109 (-)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0036858	sense intronic lncRNA gene	Chr1:159354312-159359459 (-)
C3H/HeJ	MGP_C3HHeJ_G0036543	sense intronic lncRNA gene	Chr1:163839659-163846099 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037372	sense intronic lncRNA gene	Chr1:171138710-171145850 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034433	sense intronic lncRNA gene	Chr1:150950452-150955263 (-)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0036519	sense intronic lncRNA gene	Chr1:177201755-177213094 (-)
DBA/2J	MGP_DBA2J_G0036695	sense intronic lncRNA gene	Chr1:157777217-157782003 (-)
FVB/NJ	MGP_FVBNJ_G0036647	sense intronic lncRNA gene	Chr1:156185645-156192948 (-)
LP/J	MGP_LPJ_G0036742	sense intronic lncRNA gene	Chr1:166634543-166642668 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036653	sense intronic lncRNA gene	Chr1:184695090-184703170 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037488	sense intronic lncRNA gene	Chr1:163472456-163477814 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm37529
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm37529
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00000103693 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103693	Ensembl Gene Model | MGI Sequence Detail	5393	C57BL/6J
transcript	ENSMUST00000195618	Ensembl | MGI Sequence Detail	4321	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;