Gm37423 Gene Detail

Summary

• Symbol
  Gm37423
• Name
  predicted gene, 37423

• Feature Type
  lncRNA gene
• IDs
  MGI:5610651
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:138896248-138899589 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610651	lncRNA gene	Chr1:138896248-138899589 (+)
129S1/SvImJ	ENSMUSG00200008849	lncRNA gene	Chr1:136528583-136531924 (+)
A/J	ENSMUSG00195017367	lncRNA gene	Chr1:135608945-135612279 (+)
AKR/J	ENSMUSG00220003743	lncRNA gene	Chr1:135482095-135485437 (+)
BALB/cJ	ENSMUSG00180011649	lncRNA gene	Chr1:136126099-136129441 (+)
C3H/HeJ	ENSMUSG00175006825	lncRNA gene	Chr1:135821631-135824964 (+)
C57BL/6NJ	ENSMUSG00215025606	lncRNA gene	Chr1:135828182-135831524 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013255	unclassified non-coding RNA gene	Chr1:130519129-130522430 (+)
CAST/EiJ	ENSTCUG00005013403	lncRNA gene	Chr1:134744052-134747402 (+)
CBA/J	ENSMUSG00210014447	lncRNA gene	Chr1:135772456-135775789 (+)
DBA/2J	ENSMUSG00185033617	lncRNA gene	Chr1:140145522-140148855 (+)
FVB/NJ	ENSMUSG00205002626	lncRNA gene	Chr1:135127833-135131166 (+)
JF1/MsJ	ENSUMUG00000050763	lncRNA gene	Chr1:139222464-139225811 (+)
LP/J	ENSMUSG00230040611	lncRNA gene	Chr1:139660230-139663571 (+)
NOD/ShiLtJ	ENSMUSG00190003097	lncRNA gene	Chr1:135760897-135764238 (+)
NZO/HlLtJ	ENSMUSG00225000121	lncRNA gene	Chr1:143434809-143438150 (+)
PWK/PhJ	ENSLUMG00010002021	lncRNA gene	Chr1:134841029-134844378 (+)
SPRET/EiJ	ENSMSPG00010012656	lncRNA gene	Chr1:137730498-137733871 (+)
WSB/EiJ	ENSIUOG00005030239	lncRNA gene	Chr1:135560742-135564075 (+)

Homology

• Gene Tree
  Gm37423
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm37423
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000104436 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104436	Ensembl Gene Model | MGI Sequence Detail	3342	C57BL/6J
transcript	ENSMUST00000194246	Ensembl | MGI Sequence Detail	3342	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm37423:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr9168	Chr1:138898972-138898983 (+)	2,730 bp