Gm37229 Gene Detail

Summary

• Symbol
  Gm37229
• Name
  predicted gene, 37229

• Feature Type
  lncRNA gene
• IDs
  MGI:5610457
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:51720372-51726730 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  263 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610457	lncRNA gene	Chr3:51720372-51726730 (+)
129S1/SvImJ	ENSMUSG00200000540	lncRNA gene	Chr3:48550331-48556702 (+)
A/J	ENSMUSG00195000846	lncRNA gene	Chr3:48507926-48514285 (+)
AKR/J	ENSMUSG00220015993	lncRNA gene	Chr3:48562489-48568847 (+)
BALB/cJ	ENSMUSG00180000403	lncRNA gene	Chr3:48585872-48592232 (+)
C3H/HeJ	ENSMUSG00175002209	lncRNA gene	Chr3:48421738-48428111 (+)
C57BL/6NJ	ENSMUSG00215000617	lncRNA gene	Chr3:48855443-48861801 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003358	antisense lncRNA gene	Chr3:45455381-45461689 (+)
CAST/EiJ	ENSTCUG00005010143	lncRNA gene	Chr3:48232590-48238922 (+)
CBA/J	ENSMUSG00210000761	lncRNA gene	Chr3:48533888-48540259 (+)
DBA/2J	ENSMUSG00185000346	lncRNA gene	Chr3:48770982-48777342 (+)
FVB/NJ	ENSMUSG00205009919	lncRNA gene	Chr3:47753288-47759659 (+)
JF1/MsJ	ENSUMUG00000025124	lncRNA gene	Chr3:48193660-48200031 (+)
LP/J	ENSMUSG00230000447	lncRNA gene	Chr3:50722508-50728879 (+)
NOD/ShiLtJ	ENSMUSG00190000251	lncRNA gene	Chr3:48900778-48907136 (+)
NZO/HlLtJ	ENSMUSG00225018334	lncRNA gene	Chr3:53345401-53351759 (+)
PWK/PhJ	ENSLUMG00010010502	lncRNA gene	Chr3:48356855-48363204 (+)
SPRET/EiJ	ENSMSPG00010007521	lncRNA gene	Chr3:49020715-49027041 (+)
WSB/EiJ	ENSIUOG00005000490	lncRNA gene	Chr3:48696905-48703245 (+)

Homology

• Gene Tree
  Gm37229
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm37229
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000102539 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102539	Ensembl Gene Model | MGI Sequence Detail	6359	C57BL/6J
transcript	ENSMUST00000191643	Ensembl | MGI Sequence Detail	732	Not Applicable

References

• Summaries
  All 7

  Phenotypes 5
• Earliest
  J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
• Latest
  J:157707 Puligilla C, et al., Sox2 induces neuronal formation in the developing mammalian cochlea. J Neurosci. 2010 Jan 13;30(2):714-22