Gm37146 Gene Detail

Summary

• Symbol
  Gm37146
• Name
  predicted gene, 37146

• Feature Type
  lncRNA gene
• IDs
  MGI:5610374
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:36021041-36025454 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  278 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610374	lncRNA gene	Chr1:36021041-36025454 (-)
129S1/SvImJ	ENSMUSG00200004257	lncRNA gene	Chr1:33608389-33612802 (-)
A/J	ENSMUSG00195044921	lncRNA gene	Chr1:33222910-33227235 (-)
AKR/J	ENSMUSG00220009910	lncRNA gene	Chr1:33244821-33249234 (-)
BALB/cJ	ENSMUSG00180011957	lncRNA gene	Chr1:33353700-33358113 (-)
C3H/HeJ	ENSMUSG00175001484	lncRNA gene	Chr1:33227070-33231395 (-)
C57BL/6NJ	ENSMUSG00215033240	lncRNA gene	Chr1:33330681-33335094 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004345	lincRNA gene	Chr1:30638249-30642596 (-)
CAST/EiJ	ENSTCUG00005003039	lncRNA gene	Chr1:33391484-33395858 (-)
CBA/J	ENSMUSG00210005960	lncRNA gene	Chr1:33070140-33074553 (-)
DBA/2J	ENSMUSG00185010930	lncRNA gene	Chr1:34151661-34156074 (-)
FVB/NJ	ENSMUSG00205040831	lncRNA gene	Chr1:33249058-33253471 (-)
JF1/MsJ	ENSUMUG00000024452	lncRNA gene	Chr1:33371460-33375893 (-)
LP/J	ENSMUSG00230026104	lncRNA gene	Chr1:34229265-34233678 (-)
NOD/ShiLtJ	ENSMUSG00190037483	lncRNA gene	Chr1:33270834-33275247 (-)
NZO/HlLtJ	ENSMUSG00225014300	lncRNA gene	Chr1:37458209-37462622 (-)
PWK/PhJ	ENSLUMG00010037239	lncRNA gene	Chr1:32902729-32907164 (-)
SPRET/EiJ	ENSMSPG00010031080	lncRNA gene	Chr1:34391671-34396102 (-)
WSB/EiJ	ENSIUOG00005039895	lncRNA gene	Chr1:33212551-33216964 (-)

Homology

• Gene Tree
  Gm37146
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm37146
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000102279 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102279	Ensembl Gene Model | MGI Sequence Detail	4414	C57BL/6J
transcript	ENSMUST00000192572	Ensembl | MGI Sequence Detail	463	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9