Gm37027 Gene Detail

Summary

• Symbol
  Gm37027
• Name
  predicted gene, 37027

• Feature Type
  lncRNA gene
• IDs
  MGI:5610255
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:194699941-194700593 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  8 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610255	lncRNA gene	Chr1:194699941-194700593 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0005094	lincRNA gene	Chr1:202199439-202199789 (-)
A/J	MGP_AJ_G0005077	lincRNA gene	Chr1:193896267-193896617 (-)
AKR/J	MGP_AKRJ_G0005055	lincRNA gene	Chr1:199631607-199631957 (-)
BALB/cJ	MGP_BALBcJ_G0005058	lincRNA gene	Chr1:194599844-194600194 (-)
C3H/HeJ	MGP_C3HHeJ_G0005007	lincRNA gene	Chr1:200520338-200520688 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0005208	lincRNA gene	Chr1:208566844-208567194 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004615	lincRNA gene	Chr1:185294652-185295002 (-)
CAST/EiJ	MGP_CASTEiJ_G0004954	lincRNA gene	Chr1:200087630-200087980 (-)
CBA/J	MGP_CBAJ_G0004997	lincRNA gene	Chr1:216259982-216260332 (-)
DBA/2J	MGP_DBA2J_G0005016	lincRNA gene	Chr1:192624013-192624363 (-)
FVB/NJ	MGP_FVBNJ_G0005037	lincRNA gene	Chr1:190702917-190703267 (-)
LP/J	MGP_LPJ_G0005095	lincRNA gene	Chr1:203340970-203341320 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005020	lincRNA gene	Chr1:222910971-222911321 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005215	lincRNA gene	Chr1:199486815-199487165 (-)
PWK/PhJ	MGP_PWKPhJ_G0004905	lincRNA gene	Chr1:191926459-191926809 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004830	lincRNA gene	Chr1:198529354-198529704 (-)
WSB/EiJ	MGP_WSBEiJ_G0005001	lincRNA gene	Chr1:199761691-199762041 (-)

Homology

• Gene Tree
  Gm37027
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000104077 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104077	Ensembl Gene Model | MGI Sequence Detail	653	C57BL/6J
transcript	ENSMUST00000243646	Ensembl | MGI Sequence Detail	620	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm37027:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr15868	Chr1:194700548-194700560 (-)	39 bp