Gm37025 Pseudogene Detail

Summary

• Symbol
  Gm37025
• Name
  predicted gene, 37025

• Feature Type
  pseudogene
• IDs
  MGI:5610253
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:86771799-86772627 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  152 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610253	pseudogene	Chr3:86771799-86772627 (+)
129S1/SvImJ	ENSMUSG00200039745	pseudogene	Chr3:83605048-83605876 (+)
A/J	ENSMUSG00195053668	pseudogene	Chr3:83624961-83625789 (+)
AKR/J	ENSMUSG00220051502	pseudogene	Chr3:83574847-83575661 (+)
BALB/cJ	ENSMUSG00180050482	pseudogene	Chr3:83744428-83745242 (+)
C3H/HeJ	ENSMUSG00175049504	pseudogene	Chr3:83551583-83552411 (+)
C57BL/6NJ	ENSMUSG00215050507	pseudogene	Chr3:84013901-84014729 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001948	pseudogene	Chr3:83083423-83084246 (+)
CBA/J	ENSMUSG00210047697	pseudogene	Chr3:83695841-83696669 (+)
DBA/2J	ENSMUSG00185053071	pseudogene	Chr3:83833262-83834076 (+)
FVB/NJ	ENSMUSG00205006439	pseudogene	Chr3:82661849-82662677 (+)
JF1/MsJ	ENSUMUG00000051108	pseudogene	Chr3:83395730-83396558 (+)
LP/J	ENSMUSG00230037347	pseudogene	Chr3:85825418-85826246 (+)
NOD/ShiLtJ	ENSMUSG00190049765	pseudogene	Chr3:84111350-84112178 (+)
NZO/HlLtJ	ENSMUSG00225008179	pseudogene	Chr3:88575413-88576241 (+)
PWK/PhJ	ENSLUMG00010051958	pseudogene	Chr3:83486545-83487373 (+)
SPRET/EiJ	ENSMSPG00010050186	pseudogene	Chr3:84297407-84298223 (+)
WSB/EiJ	ENSIUOG00005050845	pseudogene	Chr3:84081378-84082206 (+)

Homology

• Gene Tree
  Gm37025
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm37025
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000104074 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104074	Ensembl Gene Model | MGI Sequence Detail	829	C57BL/6J
transcript	ENSMUST00000195159	Ensembl | MGI Sequence Detail	829	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm37025:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr29795	Chr3:86770521-86770528 (+)	-1,274 bp